RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 ANKRD33BA6NCL7 494 aa7.63□□□□□ -1.19
TCN1-201ENST00000257264 USP17L5A8MUK1 530 aa7.63□□□□□ -1.19
TCN1-201ENST00000257264 PIK3CDO00329 1044 aa7.63□□□□□ -1.19
TCN1-201ENST00000257264 SKIP12755 728 aa7.63□□□□□ -1.19
TCN1-201ENST00000257264 GRIPAP1Q4V328 841 aa7.63□□□□□ -1.19
TCN1-201ENST00000257264 LARP1Q6PKG0 1096 aaKnown RBP7.63□□□□□ -1.19
TCN1-201ENST00000257264 FAM200AQ8TCP9 573 aa7.63□□□□□ -1.19
TCN1-201ENST00000257264 USP17L15C9J2P7 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L10C9JJH3 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L13C9JLJ4 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L12C9JPN9 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L11C9JVI0 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L21D6R901 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L18D6R9N7 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L22D6RA61 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L17D6RBQ6 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L19D6RCP7 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L20D6RJB6 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 VAMP1P23763 118 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 SERPINB4P48594 390 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 USP17L24Q0WX57 530 aa7.62□□□□□ -1.19
TCN1-201ENST00000257264 CDCA7Q9BWT1 371 aaPredicted RBP7.62□□□□□ -1.19
TCN1-201ENST00000257264 TRIM6-TRIM34B2RNG4 842 aa7.61□□□□□ -1.19
TCN1-201ENST00000257264 PPP1R3GB7ZBB8 358 aa7.61□□□□□ -1.19
TCN1-201ENST00000257264 MKRN1Q9UHC7 482 aaKnown RBP7.61□□□□□ -1.19
TCN1-201ENST00000257264 NUDT7P0C024 238 aa7.6□□□□□ -1.19
TCN1-201ENST00000257264 ATP2B4P23634 1241 aa7.6□□□□□ -1.19
TCN1-201ENST00000257264 FAM69CQ0P6D2 419 aa7.6□□□□□ -1.19
TCN1-201ENST00000257264 CRTC2Q53ET0 693 aaPredicted RBP7.6□□□□□ -1.19
TCN1-201ENST00000257264 NPAS4Q8IUM7 802 aa7.6□□□□□ -1.19
TCN1-201ENST00000257264 SLAIN2Q9P270 581 aa7.6□□□□□ -1.19
TCN1-201ENST00000257264 ZBBXA8MT70 800 aa7.59□□□□□ -1.19
TCN1-201ENST00000257264 RASA1P20936 1047 aa7.59□□□□□ -1.19
TCN1-201ENST00000257264 ZC3H6P61129 1189 aaKnown RBP7.59□□□□□ -1.19
TCN1-201ENST00000257264 PTK7Q13308 1070 aa7.59□□□□□ -1.19
TCN1-201ENST00000257264 BCL2L12Q9HB09 334 aa7.59□□□□□ -1.19
TCN1-201ENST00000257264 ATP5J2-PTCD1G3V325 749 aa7.59□□□□□ -1.2
TCN1-201ENST00000257264 PER1O15534 1290 aaPredicted RBP7.59□□□□□ -1.2
TCN1-201ENST00000257264 SLC10A3P09131 477 aa7.59□□□□□ -1.2
TCN1-201ENST00000257264 FBXO45P0C2W1 286 aa7.59□□□□□ -1.2
TCN1-201ENST00000257264 PTPREP23469 700 aa7.59□□□□□ -1.2
TCN1-201ENST00000257264 DEPDC4Q8N2C3 294 aa7.59□□□□□ -1.2
TCN1-201ENST00000257264 BCL11AQ9H165 835 aa7.59□□□□□ -1.2
TCN1-201ENST00000257264 SMAPO00193 183 aa7.58□□□□□ -1.2
TCN1-201ENST00000257264 PPP4R3BQ5MIZ7 849 aa7.58□□□□□ -1.2
TCN1-201ENST00000257264 HOXB1P14653 301 aaPredicted RBP7.57□□□□□ -1.2
TCN1-201ENST00000257264 DOK7Q18PE1 504 aa7.57□□□□□ -1.2
TCN1-201ENST00000257264 SWI5Q1ZZU3 235 aa7.57□□□□□ -1.2
TCN1-201ENST00000257264 ANKMY2Q8IV38 441 aa7.57□□□□□ -1.2
TCN1-201ENST00000257264 CCDC180Q9P1Z9 1646 aa7.56□□□□□ -1.2
TCN1-201ENST00000257264 C1orf216Q8TAB5 229 aa7.56□□□□□ -1.2
TCN1-201ENST00000257264 PSDA5PKW4 1024 aaPredicted RBP7.55□□□□□ -1.2
TCN1-201ENST00000257264 RIMBP2O15034 1052 aa7.55□□□□□ -1.2
TCN1-201ENST00000257264 PPM1GO15355 546 aaPredicted RBP7.55□□□□□ -1.2
TCN1-201ENST00000257264 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
TCN1-201ENST00000257264 ARSIQ5FYB1 569 aa7.55□□□□□ -1.2
TCN1-201ENST00000257264 DESI1Q6ICB0 168 aa7.55□□□□□ -1.2
TCN1-201ENST00000257264 FAM174AQ8TBP5 190 aa7.55□□□□□ -1.2
TCN1-201ENST00000257264 UBXN4Q92575 508 aa7.55□□□□□ -1.2
TCN1-201ENST00000257264 SYMPKQ92797 1274 aaKnown RBP7.55□□□□□ -1.2
TCN1-201ENST00000257264 SLC4A3P48751 1232 aa7.54□□□□□ -1.2
TCN1-201ENST00000257264 FUT2Q10981 343 aa7.54□□□□□ -1.2
TCN1-201ENST00000257264 NCOA4Q13772 614 aa7.54□□□□□ -1.2
TCN1-201ENST00000257264 SF3A1Q15459 793 aaKnown RBP7.54□□□□□ -1.2
TCN1-201ENST00000257264 SPATA32Q96LK8 384 aa7.54□□□□□ -1.2
TCN1-201ENST00000257264 EGFL7Q9UHF1 273 aa7.54□□□□□ -1.2
TCN1-201ENST00000257264 SMARCA5O60264 1052 aaPredicted RBP7.54□□□□□ -1.2
TCN1-201ENST00000257264 SLFNL1Q499Z3 407 aa7.54□□□□□ -1.2
TCN1-201ENST00000257264 RETREG3Q86VR2 466 aa7.54□□□□□ -1.2
TCN1-201ENST00000257264 ZNF592Q92610 1267 aa7.54□□□□□ -1.2
TCN1-201ENST00000257264 KHSRPQ92945 711 aaKnown RBP eCLIP7.54□□□□□ -1.2
TCN1-201ENST00000257264 PPP1R1BQ9UD71 204 aaPredicted RBP7.54□□□□□ -1.2
TCN1-201ENST00000257264 ATP6V1AP38606 617 aa7.53□□□□□ -1.2
TCN1-201ENST00000257264 HDGFP51858 240 aaKnown RBP7.53□□□□□ -1.2
TCN1-201ENST00000257264 MYT1Q01538 1121 aa7.53□□□□□ -1.2
TCN1-201ENST00000257264 NAALADL2Q58DX5 795 aa7.53□□□□□ -1.2
TCN1-201ENST00000257264 SWT1Q5T5J6 900 aaKnown RBP7.53□□□□□ -1.2
TCN1-201ENST00000257264 FBXO33Q7Z6M2 555 aa7.53□□□□□ -1.2
TCN1-201ENST00000257264 FKBPLQ9UIM3 349 aa7.53□□□□□ -1.2
TCN1-201ENST00000257264 ABL1P00519 1130 aa7.52□□□□□ -1.21
TCN1-201ENST00000257264 DPYDQ12882 1025 aa7.52□□□□□ -1.21
TCN1-201ENST00000257264 LYPD8Q6UX82 237 aa7.52□□□□□ -1.21
TCN1-201ENST00000257264 RNF135Q8IUD6 432 aa7.52□□□□□ -1.21
TCN1-201ENST00000257264 ZC3H4Q9UPT8 1303 aaKnown RBP7.52□□□□□ -1.21
TCN1-201ENST00000257264 RECKO95980 971 aa7.51□□□□□ -1.21
TCN1-201ENST00000257264 HOXB3P14651 431 aaPredicted RBP7.51□□□□□ -1.21
TCN1-201ENST00000257264 SCNN1AP37088 669 aa7.51□□□□□ -1.21
TCN1-201ENST00000257264 ZSWIM6Q9HCJ5 1215 aa7.51□□□□□ -1.21
TCN1-201ENST00000257264 CEP126Q9P2H0 1117 aa7.51□□□□□ -1.21
TCN1-201ENST00000257264 LHX6Q9UPM6 363 aa7.51□□□□□ -1.21
TCN1-201ENST00000257264 MAPK1P28482 360 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 MCCD1P59942 119 aaPredicted RBP7.5□□□□□ -1.21
TCN1-201ENST00000257264 VARS2Q5ST30 1063 aaKnown RBP7.5□□□□□ -1.21
TCN1-201ENST00000257264 TRIM50Q86XT4 487 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 ZSCAN29Q8IWY8 852 aaPredicted RBP7.5□□□□□ -1.21
TCN1-201ENST00000257264 OGFOD1Q8N543 542 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 H3BRB1 525 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 ICMTO60725 284 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 COL19A1Q14993 1142 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 EML3Q32P44 896 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms