RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 REC8O95072 547 aa20.97■□□□□ 0.95
ACTN4-201ENST00000252699 UHRF1BP1LA0JNW5 1464 aa20.97■□□□□ 0.95
ACTN4-201ENST00000252699 GZF1Q9H116 711 aaPredicted RBP20.97■□□□□ 0.95
ACTN4-201ENST00000252699 ATF7IPQ6VMQ6 1270 aa20.96■□□□□ 0.95
ACTN4-201ENST00000252699 THUMPD2Q9BTF0 503 aaKnown RBP20.96■□□□□ 0.95
ACTN4-201ENST00000252699 PZPP20742 1482 aa20.95■□□□□ 0.95
ACTN4-201ENST00000252699 TOMM22Q9NS69 142 aa20.95■□□□□ 0.94
ACTN4-201ENST00000252699 G3V3G9 751 aa20.95■□□□□ 0.94
ACTN4-201ENST00000252699 CDK11BP21127 795 aaKnown RBP20.95■□□□□ 0.94
ACTN4-201ENST00000252699 DCAF8Q5TAQ9 597 aa20.95■□□□□ 0.94
ACTN4-201ENST00000252699 RUFY2Q8WXA3 655 aa20.95■□□□□ 0.94
ACTN4-201ENST00000252699 C1orf115Q9H7X2 142 aa20.94■□□□□ 0.94
ACTN4-201ENST00000252699 DDX54Q8TDD1 881 aaKnown RBP20.93■□□□□ 0.94
ACTN4-201ENST00000252699 SPG7Q9UQ90 795 aa20.93■□□□□ 0.94
ACTN4-201ENST00000252699 MSH5O43196 834 aa20.93■□□□□ 0.94
ACTN4-201ENST00000252699 MAGI3Q5TCQ9 1506 aa20.93■□□□□ 0.94
ACTN4-201ENST00000252699 PTMSP20962 102 aa20.93■□□□□ 0.94
ACTN4-201ENST00000252699 ADGRL2O95490 1459 aa20.92■□□□□ 0.94
ACTN4-201ENST00000252699 TESK2Q96S53 571 aa20.91■□□□□ 0.94
ACTN4-201ENST00000252699 ANO2Q9NQ90 1003 aa20.91■□□□□ 0.94
ACTN4-201ENST00000252699 SURF6O75683 361 aaKnown RBP20.91■□□□□ 0.94
ACTN4-201ENST00000252699 L1TD1Q5T7N2 865 aaKnown RBP20.91■□□□□ 0.94
ACTN4-201ENST00000252699 PDZRN3Q9UPQ7 1066 aa20.91■□□□□ 0.94
ACTN4-201ENST00000252699 CABP4P57796 275 aa20.9■□□□□ 0.94
ACTN4-201ENST00000252699 NSD2O96028 1365 aa20.9■□□□□ 0.94
ACTN4-201ENST00000252699 NINLQ9Y2I6 1382 aa20.9■□□□□ 0.94
ACTN4-201ENST00000252699 DEKP35659 375 aaKnown RBP20.9■□□□□ 0.94
ACTN4-201ENST00000252699 RBM42Q9BTD8 480 aaKnown RBP20.9■□□□□ 0.94
ACTN4-201ENST00000252699 LRRFIP1Q32MZ4 808 aaKnown RBP20.9■□□□□ 0.94
ACTN4-201ENST00000252699 ZNF428Q96B54 188 aa20.9■□□□□ 0.94
ACTN4-201ENST00000252699 DCTN1Q14203 1278 aa20.9■□□□□ 0.94
ACTN4-201ENST00000252699 DNTTIP2Q5QJE6 756 aaKnown RBP20.9■□□□□ 0.94
ACTN4-201ENST00000252699 MVPQ14764 893 aaKnown RBP20.89■□□□□ 0.94
ACTN4-201ENST00000252699 MCM10Q7L590 875 aa20.89■□□□□ 0.94
ACTN4-201ENST00000252699 TULP1O00294 542 aaPredicted RBP20.89■□□□□ 0.94
ACTN4-201ENST00000252699 RIMS2Q9UQ26 1411 aa20.89■□□□□ 0.94
ACTN4-201ENST00000252699 ACEP12821 1306 aa20.89■□□□□ 0.93
ACTN4-201ENST00000252699 AMER1Q5JTC6 1135 aaPredicted RBP20.89■□□□□ 0.93
ACTN4-201ENST00000252699 HTATSF1O43719 755 aaKnown RBP20.88■□□□□ 0.93
ACTN4-201ENST00000252699 INTS3Q68E01 1043 aaKnown RBP20.88■□□□□ 0.93
ACTN4-201ENST00000252699 NUTM2BA6NNL0 878 aaPredicted RBP20.88■□□□□ 0.93
ACTN4-201ENST00000252699 NUTM2EB1AL46 878 aaPredicted RBP20.88■□□□□ 0.93
ACTN4-201ENST00000252699 NUTM2AQ8IVF1 878 aaPredicted RBP20.88■□□□□ 0.93
ACTN4-201ENST00000252699 GNAT3A8MTJ3 354 aa20.88■□□□□ 0.93
ACTN4-201ENST00000252699 GNAI2P04899 355 aa20.88■□□□□ 0.93
ACTN4-201ENST00000252699 ERC2O15083 957 aa20.87■□□□□ 0.93
ACTN4-201ENST00000252699 ZKSCAN1P17029 563 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-201ENST00000252699 FOXD4L5Q5VV16 416 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-201ENST00000252699 FOXD4L4Q8WXT5 416 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-201ENST00000252699 CCT4P50991 539 aaKnown RBP20.87■□□□□ 0.93
ACTN4-201ENST00000252699 MIS18AQ9NYP9 233 aa20.87■□□□□ 0.93
ACTN4-201ENST00000252699 FANCIQ9NVI1 1328 aa20.86■□□□□ 0.93
ACTN4-201ENST00000252699 CLASRPQ8N2M8 674 aaKnown RBP20.86■□□□□ 0.93
ACTN4-201ENST00000252699 NEUROD6Q96NK8 337 aa20.86■□□□□ 0.93
ACTN4-201ENST00000252699 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
ACTN4-201ENST00000252699 USHBP1Q8N6Y0 703 aa20.85■□□□□ 0.93
ACTN4-201ENST00000252699 ABCC11Q96J66 1382 aa20.85■□□□□ 0.93
ACTN4-201ENST00000252699 FYB1O15117 783 aa20.85■□□□□ 0.93
ACTN4-201ENST00000252699 SRCIN1Q9C0H9 1055 aa20.85■□□□□ 0.93
ACTN4-201ENST00000252699 FBLN1P23142 703 aa20.84■□□□□ 0.93
ACTN4-201ENST00000252699 GCC1Q96CN9 775 aa20.84■□□□□ 0.93
ACTN4-201ENST00000252699 C22orf23Q9BZE7 217 aa20.84■□□□□ 0.93
ACTN4-201ENST00000252699 ATP7AQ04656 1500 aa20.84■□□□□ 0.93
ACTN4-201ENST00000252699 KIF3AQ9Y496 699 aa20.84■□□□□ 0.93
ACTN4-201ENST00000252699 ZMYM3Q14202 1370 aa20.83■□□□□ 0.93
ACTN4-201ENST00000252699 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.93
ACTN4-201ENST00000252699 CDC45O75419 566 aa20.83■□□□□ 0.92
ACTN4-201ENST00000252699 SYAP1Q96A49 352 aaPredicted RBP20.83■□□□□ 0.92
ACTN4-201ENST00000252699 ANKRD36BQ8N2N9 1353 aa20.82■□□□□ 0.92
ACTN4-201ENST00000252699 RARSP54136 660 aaKnown RBP20.82■□□□□ 0.92
ACTN4-201ENST00000252699 SSH1Q8WYL5 1049 aa20.82■□□□□ 0.92
ACTN4-201ENST00000252699 GOLGA6L6A8MZA4 724 aa20.82■□□□□ 0.92
ACTN4-201ENST00000252699 IFT57Q9NWB7 429 aa20.82■□□□□ 0.92
ACTN4-201ENST00000252699 PIP4K2BP78356 416 aa20.81■□□□□ 0.92
ACTN4-201ENST00000252699 DUSP27Q5VZP5 1158 aa20.81■□□□□ 0.92
ACTN4-201ENST00000252699 MYL6BP14649 208 aa20.8■□□□□ 0.92
ACTN4-201ENST00000252699 VPS37DQ86XT2 251 aa20.8■□□□□ 0.92
ACTN4-201ENST00000252699 KRT28Q7Z3Y7 464 aa20.8■□□□□ 0.92
ACTN4-201ENST00000252699 TMEM57Q8N5G2 664 aa20.8■□□□□ 0.92
ACTN4-201ENST00000252699 NRDCO43847 1150 aa20.79■□□□□ 0.92
ACTN4-201ENST00000252699 FAM177BA6PVY3 158 aa20.79■□□□□ 0.92
ACTN4-201ENST00000252699 APPP05067 770 aa20.79■□□□□ 0.92
ACTN4-201ENST00000252699 KIF6Q6ZMV9 814 aa20.79■□□□□ 0.92
ACTN4-201ENST00000252699 RNF20Q5VTR2 975 aa20.78■□□□□ 0.92
ACTN4-201ENST00000252699 RTN4Q9NQC3 1192 aaKnown RBP20.78■□□□□ 0.92
ACTN4-201ENST00000252699 CSPP1Q1MSJ5 1256 aa20.77■□□□□ 0.92
ACTN4-201ENST00000252699 C20orf194Q5TEA3 1177 aa20.77■□□□□ 0.92
ACTN4-201ENST00000252699 ABCA8O94911 1581 aa20.77■□□□□ 0.92
ACTN4-201ENST00000252699 TTC21BQ7Z4L5 1316 aa20.77■□□□□ 0.92
ACTN4-201ENST00000252699 PUS7Q96PZ0 661 aaKnown RBP20.77■□□□□ 0.91
ACTN4-201ENST00000252699 TAF7Q15545 349 aaPredicted RBP20.76■□□□□ 0.91
ACTN4-201ENST00000252699 CADPS2Q86UW7 1296 aa20.76■□□□□ 0.91
ACTN4-201ENST00000252699 FAM184AQ8NB25 1140 aa20.76■□□□□ 0.91
ACTN4-201ENST00000252699 ASXL1Q8IXJ9 1541 aa20.76■□□□□ 0.91
ACTN4-201ENST00000252699 AMOTQ4VCS5 1084 aa20.76■□□□□ 0.91
ACTN4-201ENST00000252699 NKTRP30414 1462 aaKnown RBP20.76■□□□□ 0.91
ACTN4-201ENST00000252699 FOXD4L6Q3SYB3 417 aaPredicted RBP20.76■□□□□ 0.91
ACTN4-201ENST00000252699 FOXD4L3Q6VB84 417 aaPredicted RBP20.76■□□□□ 0.91
ACTN4-201ENST00000252699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.76■□□□□ 0.912e-6■■□□□ 12.8
ACTN4-201ENST00000252699 EIF2AK4Q9P2K8 1649 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms