RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 HSP90B2PQ58FF3 399 aa9.01□□□□□ -0.97
RIF1-201ENST00000243326 PPP4R3BQ5MIZ7 849 aa9.01□□□□□ -0.97
RIF1-201ENST00000243326 GUCY1B3Q02153 619 aa9□□□□□ -0.97
RIF1-201ENST00000243326 LMOD3Q0VAK6 560 aa9□□□□□ -0.97
RIF1-201ENST00000243326 NUTM1Q86Y26 1132 aa9□□□□□ -0.97
RIF1-201ENST00000243326 IL1RAPL2Q9NP60 686 aa9□□□□□ -0.97
RIF1-201ENST00000243326 DNA2P51530 1060 aa9□□□□□ -0.97
RIF1-201ENST00000243326 NOM1Q5C9Z4 860 aaKnown RBP9□□□□□ -0.97
RIF1-201ENST00000243326 AK7Q96M32 723 aa9□□□□□ -0.97
RIF1-201ENST00000243326 RUFY2Q8WXA3 655 aa9□□□□□ -0.97
RIF1-201ENST00000243326 UPF3BQ9BZI7 483 aaKnown RBP9□□□□□ -0.97
RIF1-201ENST00000243326 RRP9O43818 475 aaKnown RBP9□□□□□ -0.97
RIF1-201ENST00000243326 C1orf141Q5JVX7 400 aa9□□□□□ -0.97
RIF1-201ENST00000243326 SMG6Q86US8 1419 aaKnown RBP9□□□□□ -0.97
RIF1-201ENST00000243326 PRKAR2BP31323 418 aa9□□□□□ -0.97
RIF1-201ENST00000243326 IPO4Q8TEX9 1081 aaKnown RBP9□□□□□ -0.97
RIF1-201ENST00000243326 TAF3Q5VWG9 929 aa9□□□□□ -0.97
RIF1-201ENST00000243326 SURF6O75683 361 aaKnown RBP8.99□□□□□ -0.97
RIF1-201ENST00000243326 TOP2AP11388 1531 aaKnown RBP8.99□□□□□ -0.97
RIF1-201ENST00000243326 KIF3AQ9Y496 699 aa8.99□□□□□ -0.97
RIF1-201ENST00000243326 USP25Q9UHP3 1055 aa8.99□□□□□ -0.97
RIF1-201ENST00000243326 PNISRQ8TF01 805 aaKnown RBP8.99□□□□□ -0.97
RIF1-201ENST00000243326 TNNQ9UQP3 1299 aa8.99□□□□□ -0.97
RIF1-201ENST00000243326 RAB11FIP4Q86YS3 637 aa8.99□□□□□ -0.97
RIF1-201ENST00000243326 GTF2F1P35269 517 aaKnown RBP eCLIP8.99□□□□□ -0.97
RIF1-201ENST00000243326 ZFYVE27Q5T4F4 411 aa8.99□□□□□ -0.97
RIF1-201ENST00000243326 TICAM2Q86XR7 235 aa8.99□□□□□ -0.97
RIF1-201ENST00000243326 CCDC112Q8NEF3 446 aa8.99□□□□□ -0.97
RIF1-201ENST00000243326 TMEM57Q8N5G2 664 aa8.99□□□□□ -0.97
RIF1-201ENST00000243326 SERPINC1P01008 464 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 PPARDQ03181 441 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 STK38Q15208 465 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 TBC1D2Q9BYX2 928 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 CKAP2LQ8IYA6 745 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 KINO60870 393 aaKnown RBP8.98□□□□□ -0.97
RIF1-201ENST00000243326 UBTFL1P0CB47 393 aaPredicted RBP8.98□□□□□ -0.97
RIF1-201ENST00000243326 API5Q9BZZ5 524 aaKnown RBP8.98□□□□□ -0.97
RIF1-201ENST00000243326 EVC2Q86UK5 1308 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 KAT6BQ8WYB5 2073 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 EFCAB2Q5VUJ9 269 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 CHD1LQ86WJ1 897 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 IGHDP01880 384 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 BRD4O60885 1362 aaPredicted RBP8.98□□□□□ -0.97
RIF1-201ENST00000243326 UBE2Q2Q8WVN8 375 aa8.98□□□□□ -0.97
RIF1-201ENST00000243326 DCTN1Q14203 1278 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 CCDC34Q96HJ3 373 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 C16orf45Q96MC5 204 aaPredicted RBP8.97□□□□□ -0.97
RIF1-201ENST00000243326 CFAP70Q5T0N1 1121 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 CCDC83Q8IWF9 413 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 TNPO1Q92973 898 aaKnown RBP8.97□□□□□ -0.97
RIF1-201ENST00000243326 LEKR1Q6ZMV7 388 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 CCDC102AQ96A19 550 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 CWC27Q6UX04 472 aaKnown RBP8.97□□□□□ -0.97
RIF1-201ENST00000243326 CCDC85AQ96PX6 553 aaPredicted RBP8.97□□□□□ -0.97
RIF1-201ENST00000243326 IPO7O95373 1038 aaKnown RBP8.97□□□□□ -0.97
RIF1-201ENST00000243326 HSP90AB2PQ58FF8 381 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 ZSCAN30Q86W11 494 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 NACADO15069 1562 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 CCDC66A2RUB6 948 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 RIC3Q7Z5B4 369 aa8.97□□□□□ -0.97
RIF1-201ENST00000243326 VGLL3A8MV65 326 aa8.96□□□□□ -0.97
RIF1-201ENST00000243326 CT47B1P0C2W7 299 aaPredicted RBP8.96□□□□□ -0.97
RIF1-201ENST00000243326 RDXP35241 583 aaKnown RBP8.96□□□□□ -0.98
RIF1-201ENST00000243326 ME1P48163 572 aa8.96□□□□□ -0.98
RIF1-201ENST00000243326 ZSWIM4Q9H7M6 989 aa8.96□□□□□ -0.98
RIF1-201ENST00000243326 RNF216Q9NWF9 866 aaPredicted RBP8.96□□□□□ -0.98
RIF1-201ENST00000243326 JAKMIP1Q96N16 626 aaKnown RBP8.96□□□□□ -0.98
RIF1-201ENST00000243326 CWC15Q9P013 229 aaKnown RBP8.96□□□□□ -0.98
RIF1-201ENST00000243326 FGD6Q6ZV73 1430 aa8.96□□□□□ -0.98
RIF1-201ENST00000243326 TAX1BP1Q86VP1 789 aa8.96□□□□□ -0.98
RIF1-201ENST00000243326 C17orf53Q8N3J3 647 aaPredicted RBP8.96□□□□□ -0.98
RIF1-201ENST00000243326 RBM42Q9BTD8 480 aaKnown RBP8.96□□□□□ -0.98
RIF1-201ENST00000243326 SLC12A5Q9H2X9 1139 aa8.95□□□□□ -0.98
RIF1-201ENST00000243326 EXOC6BQ9Y2D4 811 aa8.95□□□□□ -0.98
RIF1-201ENST00000243326 BIN1O00499 593 aa8.95□□□□□ -0.98
RIF1-201ENST00000243326 RABEP1Q15276 862 aa8.95□□□□□ -0.98
RIF1-201ENST00000243326 LRRC9Q6ZRR7 1453 aa8.95□□□□□ -0.98
RIF1-201ENST00000243326 ANKRD20A12PQ8NF67 263 aa8.95□□□□□ -0.98
RIF1-201ENST00000243326 RRAGDQ9NQL2 400 aaPredicted RBP8.95□□□□□ -0.98
RIF1-201ENST00000243326 TWISTNBQ3B726 338 aaPredicted RBP8.95□□□□□ -0.98
RIF1-201ENST00000243326 CPLX3Q8WVH0 158 aa8.95□□□□□ -0.98
RIF1-201ENST00000243326 ERC2O15083 957 aa8.95□□□□□ -0.98
RIF1-201ENST00000243326 TRDNQ13061 729 aa8.94□□□□□ -0.98
RIF1-201ENST00000243326 CNTROBQ8N137 903 aa8.94□□□□□ -0.98
RIF1-201ENST00000243326 TFIP11Q9UBB9 837 aaKnown RBP8.94□□□□□ -0.98
RIF1-201ENST00000243326 SLC4A2P04920 1241 aa8.94□□□□□ -0.98
RIF1-201ENST00000243326 RRS1Q15050 365 aaKnown RBP8.94□□□□□ -0.98
RIF1-201ENST00000243326 ENOX2Q16206 610 aaKnown RBP8.94□□□□□ -0.98
RIF1-201ENST00000243326 HSP90AA4PQ58FG1 418 aa8.94□□□□□ -0.98
RIF1-201ENST00000243326 LARP1BQ659C4 914 aaKnown RBP8.94□□□□□ -0.98
RIF1-201ENST00000243326 LRRFIP2Q9Y608 721 aaKnown RBP8.94□□□□□ -0.98
RIF1-201ENST00000243326 RAD54L2Q9Y4B4 1467 aa8.94□□□□□ -0.98
RIF1-201ENST00000243326 NAT10Q9H0A0 1025 aaKnown RBP8.94□□□□□ -0.98
RIF1-201ENST00000243326 NEXNQ0ZGT2 675 aa8.94□□□□□ -0.98
RIF1-201ENST00000243326 VPS37DQ86XT2 251 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.93□□□□□ -0.98
RIF1-201ENST00000243326 RNF20Q5VTR2 975 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 JARID2Q92833 1246 aaPredicted RBP8.93□□□□□ -0.98
RIF1-201ENST00000243326 F6X3S4 739 aa8.93□□□□□ -0.98
RIF1-201ENST00000243326 PDRG1Q9NUG6 133 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms