RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
SYPL1-201ENST00000011473 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
SYPL1-201ENST00000011473 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.73■□□□□ 0.27
SYPL1-201ENST00000011473 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
SYPL1-201ENST00000011473 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
SYPL1-201ENST00000011473 ABTB2Q8N961 1025 aa16.72■□□□□ 0.27
SYPL1-201ENST00000011473 LRP6O75581 1613 aa16.72■□□□□ 0.27
SYPL1-201ENST00000011473 NINLQ9Y2I6 1382 aa16.71■□□□□ 0.27
SYPL1-201ENST00000011473 SSH2Q76I76 1423 aa16.71■□□□□ 0.27
SYPL1-201ENST00000011473 SHPRHQ149N8 1683 aa16.71■□□□□ 0.27
SYPL1-201ENST00000011473 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
SYPL1-201ENST00000011473 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
SYPL1-201ENST00000011473 ADAMTS2O95450 1211 aa16.7■□□□□ 0.26
SYPL1-201ENST00000011473 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
SYPL1-201ENST00000011473 MYOM1P52179 1685 aa16.7■□□□□ 0.26
SYPL1-201ENST00000011473 ARHGEF10O15013 1369 aa16.7■□□□□ 0.26
SYPL1-201ENST00000011473 ANKRD36BQ8N2N9 1353 aa16.7■□□□□ 0.26
SYPL1-201ENST00000011473 ALS2Q96Q42 1657 aa16.69■□□□□ 0.26
SYPL1-201ENST00000011473 ZRANB1Q9UGI0 708 aa16.69■□□□□ 0.26
SYPL1-201ENST00000011473 AKAP12Q02952 1782 aa16.68■□□□□ 0.26
SYPL1-201ENST00000011473 HAP1P54257 671 aaPredicted RBP16.68■□□□□ 0.26
SYPL1-201ENST00000011473 NME9Q86XW9 330 aa16.68■□□□□ 0.26
SYPL1-201ENST00000011473 CARD14Q9BXL6 1004 aa16.68■□□□□ 0.26
SYPL1-201ENST00000011473 NLRP6P59044 892 aa16.67■□□□□ 0.26
SYPL1-201ENST00000011473 NRKQ7Z2Y5 1582 aa16.67■□□□□ 0.26
SYPL1-201ENST00000011473 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
SYPL1-201ENST00000011473 MED1Q15648 1581 aaPredicted RBP16.66■□□□□ 0.26
SYPL1-201ENST00000011473 EDC4Q6P2E9 1401 aaKnown RBP16.66■□□□□ 0.26
SYPL1-201ENST00000011473 MEX3CQ5U5Q3 659 aaKnown RBP16.66■□□□□ 0.26
SYPL1-201ENST00000011473 PANK3Q9H999 370 aa16.66■□□□□ 0.26
SYPL1-201ENST00000011473 MON2Q7Z3U7 1717 aa16.66■□□□□ 0.26
SYPL1-201ENST00000011473 COL22A1Q8NFW1 1626 aaPredicted RBP16.66■□□□□ 0.26
SYPL1-201ENST00000011473 C8orf37Q96NL8 207 aa16.66■□□□□ 0.26
SYPL1-201ENST00000011473 SOX12O15370 315 aa16.65■□□□□ 0.26
SYPL1-201ENST00000011473 PIK3C2AO00443 1686 aa16.65■□□□□ 0.26
SYPL1-201ENST00000011473 TTC21AQ8NDW8 1320 aa16.65■□□□□ 0.26
SYPL1-201ENST00000011473 NSD3Q9BZ95 1437 aa16.64■□□□□ 0.25
SYPL1-201ENST00000011473 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
SYPL1-201ENST00000011473 NLRP13Q86W25 1043 aa16.63■□□□□ 0.25
SYPL1-201ENST00000011473 ZC3H6P61129 1189 aaKnown RBP16.62■□□□□ 0.25
SYPL1-201ENST00000011473 GGNBP2Q9H3C7 697 aa16.61■□□□□ 0.25
SYPL1-201ENST00000011473 USP19O94966 1318 aa16.61■□□□□ 0.25
SYPL1-201ENST00000011473 GCP02774 474 aa16.61■□□□□ 0.25
SYPL1-201ENST00000011473 FYB1O15117 783 aa16.6■□□□□ 0.25
SYPL1-201ENST00000011473 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
SYPL1-201ENST00000011473 NGLY1Q96IV0 654 aa16.6■□□□□ 0.25
SYPL1-201ENST00000011473 ABCA3Q99758 1704 aa16.6■□□□□ 0.25
SYPL1-201ENST00000011473 ZBTB7CA1YPR0 619 aa16.59■□□□□ 0.25
SYPL1-201ENST00000011473 KIAA0232Q92628 1395 aa16.59■□□□□ 0.25
SYPL1-201ENST00000011473 FBLN1P23142 703 aa16.58■□□□□ 0.25
SYPL1-201ENST00000011473 CHRNA2Q15822 529 aa16.58■□□□□ 0.25
SYPL1-201ENST00000011473 CRYBG1Q9Y4K1 1723 aa16.58■□□□□ 0.25
SYPL1-201ENST00000011473 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
SYPL1-201ENST00000011473 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.24
SYPL1-201ENST00000011473 CNGB1Q14028 1251 aaPredicted RBP16.57■□□□□ 0.24
SYPL1-201ENST00000011473 PRDM11Q9NQV5 511 aa16.57■□□□□ 0.24
SYPL1-201ENST00000011473 RGS17Q9UGC6 210 aaPredicted RBP16.57■□□□□ 0.24
SYPL1-201ENST00000011473 AFF2P51816 1311 aa16.57■□□□□ 0.24
SYPL1-201ENST00000011473 USP31Q70CQ4 1352 aa16.57■□□□□ 0.24
SYPL1-201ENST00000011473 OVOS2A0A0J9YW53 1432 aa16.57■□□□□ 0.24
SYPL1-201ENST00000011473 OVOS2Q6IE36 1432 aa16.57■□□□□ 0.24
SYPL1-201ENST00000011473 COG3Q96JB2 828 aa16.57■□□□□ 0.24
SYPL1-201ENST00000011473 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
SYPL1-201ENST00000011473 CGNL1Q0VF96 1302 aa16.56■□□□□ 0.24
SYPL1-201ENST00000011473 SLIT3O75094 1523 aa16.55■□□□□ 0.24
SYPL1-201ENST00000011473 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
SYPL1-201ENST00000011473 PER1O15534 1290 aaPredicted RBP16.54■□□□□ 0.24
SYPL1-201ENST00000011473 KCNH5Q8NCM2 988 aa16.53■□□□□ 0.24
SYPL1-201ENST00000011473 BTG4Q9NY30 223 aa16.53■□□□□ 0.24
SYPL1-201ENST00000011473 USP21Q9UK80 565 aa16.53■□□□□ 0.24
SYPL1-201ENST00000011473 TNNT2P45379 298 aaPredicted RBP16.52■□□□□ 0.24
SYPL1-201ENST00000011473 FNBP4Q8N3X1 1017 aaPredicted RBP16.52■□□□□ 0.24
SYPL1-201ENST00000011473 NFAT5O94916 1531 aa16.52■□□□□ 0.23
SYPL1-201ENST00000011473 DDX10Q13206 875 aaKnown RBP16.52■□□□□ 0.23
SYPL1-201ENST00000011473 BCL9LQ86UU0 1499 aa16.51■□□□□ 0.23
SYPL1-201ENST00000011473 CPDO75976 1380 aa16.51■□□□□ 0.23
SYPL1-201ENST00000011473 POTEAQ6S8J7 498 aa16.51■□□□□ 0.23
SYPL1-201ENST00000011473 RRS1Q15050 365 aaKnown RBP16.51■□□□□ 0.23
SYPL1-201ENST00000011473 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
SYPL1-201ENST00000011473 CC2D1BQ5T0F9 858 aaKnown RBP16.51■□□□□ 0.23
SYPL1-201ENST00000011473 ARHGEF25Q86VW2 580 aa16.51■□□□□ 0.23
SYPL1-201ENST00000011473 SLIT2O94813 1529 aa16.5■□□□□ 0.23
SYPL1-201ENST00000011473 KIF20BQ96Q89 1820 aa16.49■□□□□ 0.23
SYPL1-201ENST00000011473 AXIN2Q9Y2T1 843 aa16.49■□□□□ 0.23
SYPL1-201ENST00000011473 STRN4Q9NRL3 753 aa16.49■□□□□ 0.23
SYPL1-201ENST00000011473 USP54Q70EL1 1684 aa16.49■□□□□ 0.23
SYPL1-201ENST00000011473 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
SYPL1-201ENST00000011473 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
SYPL1-201ENST00000011473 UNC5CLQ8IV45 518 aa16.48■□□□□ 0.23
SYPL1-201ENST00000011473 QTRT2Q9H974 415 aaKnown RBP16.48■□□□□ 0.23
SYPL1-201ENST00000011473 MAP3K19Q56UN5 1328 aa16.47■□□□□ 0.23
SYPL1-201ENST00000011473 PLCH1Q4KWH8 1693 aa16.47■□□□□ 0.23
SYPL1-201ENST00000011473 CAMTA1Q9Y6Y1 1673 aa16.46■□□□□ 0.23
SYPL1-201ENST00000011473 COL14A1Q05707 1796 aaKnown RBP16.46■□□□□ 0.23
SYPL1-201ENST00000011473 MORC1Q86VD1 984 aa16.46■□□□□ 0.23
SYPL1-201ENST00000011473 AATKQ6ZMQ8 1374 aa16.46■□□□□ 0.23
SYPL1-201ENST00000011473 CCDC9Q9Y3X0 531 aaKnown RBP16.45■□□□□ 0.22
SYPL1-201ENST00000011473 EMILIN1Q9Y6C2 1016 aa16.45■□□□□ 0.22
SYPL1-201ENST00000011473 NSD2O96028 1365 aa16.45■□□□□ 0.22
SYPL1-201ENST00000011473 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms