RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 TRPM3Q9HCF6 1732 aaPredicted RBP27.65■■■□□ 2.02
TRAPPC6A-201ENST00000006275 ADGRB2O60241 1585 aa27.64■■■□□ 2.01
TRAPPC6A-201ENST00000006275 EIF3AQ14152 1382 aaKnown RBP27.63■■■□□ 2.01
TRAPPC6A-201ENST00000006275 PRDM11Q9NQV5 511 aa27.63■■■□□ 2.01
TRAPPC6A-201ENST00000006275 DISP2A7MBM2 1401 aa27.63■■■□□ 2.01
TRAPPC6A-201ENST00000006275 MINK1Q8N4C8 1332 aaPredicted RBP27.62■■■□□ 2.01
TRAPPC6A-201ENST00000006275 ALS2Q96Q42 1657 aa27.62■■■□□ 2.01
TRAPPC6A-201ENST00000006275 PAK3O75914 559 aaPredicted RBP27.61■■■□□ 2.01
TRAPPC6A-201ENST00000006275 TRAK1Q9UPV9 953 aa27.61■■■□□ 2.01
TRAPPC6A-201ENST00000006275 PRR36Q9H6K5 1346 aa27.61■■■□□ 2.01
TRAPPC6A-201ENST00000006275 TRIM26Q12899 539 aaPredicted RBP27.6■■■□□ 2.01
TRAPPC6A-201ENST00000006275 EZH2Q15910 746 aaKnown RBP27.6■■■□□ 2.01
TRAPPC6A-201ENST00000006275 NGDNQ8NEJ9 315 aaKnown RBP27.6■■■□□ 2.01
TRAPPC6A-201ENST00000006275 THSD7AQ9UPZ6 1657 aa27.59■■■□□ 2.01
TRAPPC6A-201ENST00000006275 TULP4Q9NRJ4 1543 aa27.57■■■□□ 2
TRAPPC6A-201ENST00000006275 TRIM37O94972 964 aa27.56■■■□□ 2
TRAPPC6A-201ENST00000006275 ADGRB1O14514 1584 aa27.56■■■□□ 2
TRAPPC6A-201ENST00000006275 TNS1Q9HBL0 1735 aaKnown RBP27.55■■■□□ 2
TRAPPC6A-201ENST00000006275 WASLO00401 505 aaPredicted RBP27.55■■■□□ 2
TRAPPC6A-201ENST00000006275 FAM196AQ6ZSG2 479 aa27.55■■■□□ 2
TRAPPC6A-201ENST00000006275 SPATA31A1Q5TZJ5 1347 aa27.55■■■□□ 2
TRAPPC6A-201ENST00000006275 CAMKK2Q96RR4 588 aa27.54■■■□□ 2
TRAPPC6A-201ENST00000006275 KIAA0232Q92628 1395 aa27.53■■■□□ 2
TRAPPC6A-201ENST00000006275 STRN4Q9NRL3 753 aa27.53■■■□□ 2
TRAPPC6A-201ENST00000006275 CHRNA2Q15822 529 aa27.52■■■□□ 2
TRAPPC6A-201ENST00000006275 CRYBG1Q9Y4K1 1723 aa27.51■■□□□ 1.99
TRAPPC6A-201ENST00000006275 APBA3O96018 575 aa27.51■■□□□ 1.99
TRAPPC6A-201ENST00000006275 PARD3Q8TEW0 1356 aa27.49■■□□□ 1.99
TRAPPC6A-201ENST00000006275 USP35Q9P2H5 1018 aa27.48■■□□□ 1.99
TRAPPC6A-201ENST00000006275 ZC3H6P61129 1189 aaKnown RBP27.47■■□□□ 1.99
TRAPPC6A-201ENST00000006275 KDM2AQ9Y2K7 1162 aa27.47■■□□□ 1.99
TRAPPC6A-201ENST00000006275 PDE3BQ13370 1112 aa27.44■■□□□ 1.98
TRAPPC6A-201ENST00000006275 NUTM2GQ5VZR2 741 aa27.44■■□□□ 1.98
TRAPPC6A-201ENST00000006275 EVA1CP58658 441 aa27.43■■□□□ 1.98
TRAPPC6A-201ENST00000006275 NUDT16Q96DE0 195 aaKnown RBP27.43■■□□□ 1.98
TRAPPC6A-201ENST00000006275 DCAF11Q8TEB1 546 aa27.42■■□□□ 1.98
TRAPPC6A-201ENST00000006275 ATP7BP35670 1465 aa27.42■■□□□ 1.98
TRAPPC6A-201ENST00000006275 NBPF8Q3BBV2 869 aa27.41■■□□□ 1.98
TRAPPC6A-201ENST00000006275 NBPF14Q5TI25 921 aa27.41■■□□□ 1.98
TRAPPC6A-201ENST00000006275 BARGINQ6ZT62 677 aa27.41■■□□□ 1.98
TRAPPC6A-201ENST00000006275 YY1P25490 414 aa27.4■■□□□ 1.98
TRAPPC6A-201ENST00000006275 PHRF1Q9P1Y6 1649 aaKnown RBP27.4■■□□□ 1.98
TRAPPC6A-201ENST00000006275 SSH2Q76I76 1423 aa27.4■■□□□ 1.98
TRAPPC6A-201ENST00000006275 ITSN1Q15811 1721 aa27.38■■□□□ 1.97
TRAPPC6A-201ENST00000006275 LARP1Q6PKG0 1096 aaKnown RBP27.36■■□□□ 1.97
TRAPPC6A-201ENST00000006275 TCP11L2Q8N4U5 519 aa27.36■■□□□ 1.97
TRAPPC6A-201ENST00000006275 PPP1R1BQ9UD71 204 aaPredicted RBP27.35■■□□□ 1.97
TRAPPC6A-201ENST00000006275 RREB1Q92766 1687 aa27.35■■□□□ 1.97
TRAPPC6A-201ENST00000006275 CDK19Q9BWU1 502 aa27.34■■□□□ 1.97
TRAPPC6A-201ENST00000006275 NUP188Q5SRE5 1749 aa27.33■■□□□ 1.97
TRAPPC6A-201ENST00000006275 STAC3Q96MF2 364 aa27.33■■□□□ 1.97
TRAPPC6A-201ENST00000006275 ACEP12821 1306 aa27.33■■□□□ 1.97
TRAPPC6A-201ENST00000006275 POLR3AO14802 1390 aaPredicted RBP27.33■■□□□ 1.97
TRAPPC6A-201ENST00000006275 SPON1Q9HCB6 807 aa27.32■■□□□ 1.96
TRAPPC6A-201ENST00000006275 CAMTA1Q9Y6Y1 1673 aa27.31■■□□□ 1.96
TRAPPC6A-201ENST00000006275 ARHGEF28Q8N1W1 1705 aaKnown RBP27.31■■□□□ 1.96
TRAPPC6A-201ENST00000006275 ABTB2Q8N961 1025 aa27.31■■□□□ 1.96
TRAPPC6A-201ENST00000006275 CCDC61Q9Y6R9 512 aa27.3■■□□□ 1.96
TRAPPC6A-201ENST00000006275 NRKQ7Z2Y5 1582 aa27.3■■□□□ 1.96
TRAPPC6A-201ENST00000006275 THRAP3Q9Y2W1 955 aaKnown RBP27.29■■□□□ 1.96
TRAPPC6A-201ENST00000006275 CPDO75976 1380 aa27.29■■□□□ 1.96
TRAPPC6A-201ENST00000006275 DCAF8L1A6NGE4 600 aa27.28■■□□□ 1.96
TRAPPC6A-201ENST00000006275 KCNQ2O43526 872 aa27.28■■□□□ 1.96
TRAPPC6A-201ENST00000006275 USP19O94966 1318 aa27.26■■□□□ 1.95
TRAPPC6A-201ENST00000006275 PLEKHG3A1L390 1219 aa27.26■■□□□ 1.95
TRAPPC6A-201ENST00000006275 NINLQ9Y2I6 1382 aa27.24■■□□□ 1.95
TRAPPC6A-201ENST00000006275 TOPAZ1Q8N9V7 1692 aa27.24■■□□□ 1.95
TRAPPC6A-201ENST00000006275 LMO7Q8WWI1 1683 aa27.24■■□□□ 1.95
TRAPPC6A-201ENST00000006275 C11orf95C9JLR9 678 aaPredicted RBP27.24■■□□□ 1.95
TRAPPC6A-201ENST00000006275 NLRP13Q86W25 1043 aa27.23■■□□□ 1.95
TRAPPC6A-201ENST00000006275 SIN3AQ96ST3 1273 aa27.23■■□□□ 1.95
TRAPPC6A-201ENST00000006275 GCP02774 474 aa27.22■■□□□ 1.95
TRAPPC6A-201ENST00000006275 COL5A2P05997 1499 aaPredicted RBP27.21■■□□□ 1.95
TRAPPC6A-201ENST00000006275 NEUROD1Q13562 356 aa27.21■■□□□ 1.95
TRAPPC6A-201ENST00000006275 OVOS2A0A0G2JMS6 1433 aa27.21■■□□□ 1.95
TRAPPC6A-201ENST00000006275 OVOS2A0A0J9YW53 1432 aa27.21■■□□□ 1.95
TRAPPC6A-201ENST00000006275 OVOS2Q6IE36 1432 aa27.21■■□□□ 1.95
TRAPPC6A-201ENST00000006275 PARP4Q9UKK3 1724 aaKnown RBP27.19■■□□□ 1.94
TRAPPC6A-201ENST00000006275 ZBTB7CA1YPR0 619 aa27.19■■□□□ 1.94
TRAPPC6A-201ENST00000006275 CRB1P82279 1406 aa27.18■■□□□ 1.94
TRAPPC6A-201ENST00000006275 SRPK2P78362 688 aaKnown RBP27.16■■□□□ 1.94
TRAPPC6A-201ENST00000006275 PCGF6Q9BYE7 350 aa27.16■■□□□ 1.94
TRAPPC6A-201ENST00000006275 PLSCR1O15162 318 aa27.15■■□□□ 1.94
TRAPPC6A-201ENST00000006275 PPIP5K1Q6PFW1 1433 aa27.15■■□□□ 1.94
TRAPPC6A-201ENST00000006275 DDB1Q16531 1140 aa27.14■■□□□ 1.94
TRAPPC6A-201ENST00000006275 ANO8Q9HCE9 1232 aaPredicted RBP27.14■■□□□ 1.94
TRAPPC6A-201ENST00000006275 L3MBTL2Q969R5 705 aa27.13■■□□□ 1.93
TRAPPC6A-201ENST00000006275 PEAK1Q9H792 1746 aa27.11■■□□□ 1.93
TRAPPC6A-201ENST00000006275 TOM1L2Q6ZVM7 507 aa27.11■■□□□ 1.93
TRAPPC6A-201ENST00000006275 BCL11BQ9C0K0 894 aaPredicted RBP27.11■■□□□ 1.93
TRAPPC6A-201ENST00000006275 AATKQ6ZMQ8 1374 aa27.1■■□□□ 1.93
TRAPPC6A-201ENST00000006275 NLRP6P59044 892 aa27.1■■□□□ 1.93
TRAPPC6A-201ENST00000006275 CABP2Q9NPB3 220 aa27.1■■□□□ 1.93
TRAPPC6A-201ENST00000006275 BRD4O60885 1362 aaPredicted RBP27.09■■□□□ 1.93
TRAPPC6A-201ENST00000006275 RGPD3A6NKT7 1758 aaPredicted RBP27.09■■□□□ 1.93
TRAPPC6A-201ENST00000006275 RGPD4Q7Z3J3 1758 aa27.09■■□□□ 1.93
TRAPPC6A-201ENST00000006275 LRRC37A3O60309 1634 aa27.09■■□□□ 1.93
TRAPPC6A-201ENST00000006275 PTF1AQ7RTS3 328 aa27.08■■□□□ 1.93
TRAPPC6A-201ENST00000006275 ZBTB7AO95365 584 aa27.07■■□□□ 1.92
TRAPPC6A-201ENST00000006275 NBPF1Q3BBV0 1214 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms