RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 HSPH1Q92598 858 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 ART4Q93070 314 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 SPATA17Q96L03 361 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 TMEM121BQ9BXQ6 578 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-234ENST00000642041 GPR62Q9BZJ7 368 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 ULBP1Q9BZM6 244 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 OLA1Q9NTK5 396 aaKnown RBP17.76■□□□□ 0.43
PHGDH-234ENST00000642041 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.76■□□□□ 0.43
PHGDH-234ENST00000642041 NDRG2Q9UN36 371 aaKnown RBP17.76■□□□□ 0.43
PHGDH-234ENST00000642041 WDFY3Q8IZQ1 3526 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 LAMA1P25391 3075 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 GOLGA8KD6RF30 607 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 ECI2O75521 394 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 SEC31AO94979 1220 aaKnown RBP17.75■□□□□ 0.43
PHGDH-234ENST00000642041 KRT14P02533 472 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 RARGP13631 454 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 BDNFP23560 247 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 IL1R2P27930 398 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 CXCL12P48061 93 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 TUFMP49411 452 aaKnown RBP17.75■□□□□ 0.43
PHGDH-234ENST00000642041 KPNA1P52294 538 aaPredicted RBP17.75■□□□□ 0.43
PHGDH-234ENST00000642041 HDAC4P56524 1084 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 STPG1Q5TH74 334 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 KAZNQ674X7 775 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 SLC9A4Q6AI14 798 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 AADACL2Q6P093 401 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 PPP1R21Q6ZMI0 780 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 CEP57Q86XR8 500 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 RELL1Q8IUW5 271 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 ZNF276Q8N554 614 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 FAM160A2Q8N612 972 aaPredicted RBP17.75■□□□□ 0.43
PHGDH-234ENST00000642041 ALLCQ8N6M5 410 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 DNASE1L2Q92874 299 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 HPCAL4Q9UM19 191 aa17.75■□□□□ 0.43
PHGDH-234ENST00000642041 CHURC1-FNTBB4DL54 471 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 HHLA1C9JL84 531 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 M0QYT0 321 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 CLDN5O00501 218 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 PPFIA2O75334 1257 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 ZNF806P0C7X5 589 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 FNTBP49356 437 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 SRSF5Q13243 272 aaKnown RBP17.74■□□□□ 0.43
PHGDH-234ENST00000642041 DPYSL3Q14195 570 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 MORF4L2Q15014 288 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 SF3A2Q15428 464 aaKnown RBP17.74■□□□□ 0.43
PHGDH-234ENST00000642041 OASLQ15646 514 aaKnown RBP17.74■□□□□ 0.43
PHGDH-234ENST00000642041 CDO1Q16878 200 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 C15orf59Q2T9L4 293 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-234ENST00000642041 ATP13A4Q4VNC1 1196 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 ANKRD20A8PQ5CZ79 823 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 BTBD8Q5XKL5 378 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 TTC27Q6P3X3 843 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 HOOK3Q86VS8 718 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 CDKL3Q8IVW4 592 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-234ENST00000642041 PIK3R5Q8WYR1 880 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 SNRNP25Q9BV90 132 aaKnown RBP17.74■□□□□ 0.43
PHGDH-234ENST00000642041 STMN4Q9H169 189 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-234ENST00000642041 RETREG1Q9H6L5 497 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 PPCSQ9HAB8 311 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 LMAN1LQ9HAT1 526 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 PCDH18Q9HCL0 1135 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 RXFP3Q9NSD7 469 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 ANAPC5Q9UJX4 755 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 FBXW11Q9UKB1 542 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 FZD10Q9ULW2 581 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 AP4E1Q9UPM8 1137 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 SCML2Q9UQR0 700 aa17.74■□□□□ 0.43
PHGDH-234ENST00000642041 ASH1LQ9NR48 2969 aaKnown RBP17.74■□□□□ 0.43
PHGDH-234ENST00000642041 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-234ENST00000642041 TAF4O00268 1085 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 MTSS1O43312 755 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 GRAP2O75791 330 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 GABBR2O75899 941 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 NCAM1P13591 858 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 HOXA9P31269 272 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 PLTPP55058 493 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 SATB1Q01826 763 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 ZNF33AQ06730 810 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 NOMO1Q15155 1222 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 KCNT1Q5JUK3 1230 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 TPGS2Q68CL5 300 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 LONP2Q86WA8 852 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 NPAS3Q8IXF0 933 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 ZMIZ2Q8NF64 920 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 RNF139Q8WU17 664 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 OVCA2Q8WZ82 227 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 B3GALT6Q96L58 329 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 PLA2G2FQ9BZM2 168 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 WDCPQ9H6R7 721 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 ZDHHC18Q9NUE0 388 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 CLIC5Q9NZA1 410 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 IL37Q9NZH6 218 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 SLC12A6Q9UHW9 1150 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 WASF3Q9UPY6 502 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 SNX24Q9Y343 169 aa17.73■□□□□ 0.43
PHGDH-234ENST00000642041 TCRBV7S2A1N4TA0A589 114 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 FAM170AA1A519 330 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 BCLAF3A2AJT9 711 aaKnown RBP17.72■□□□□ 0.43
PHGDH-234ENST00000642041 EIF3HO15372 352 aaKnown RBP eCLIP17.72■□□□□ 0.43
PHGDH-234ENST00000642041 HCRTO43612 131 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms