RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 DRC7Q8IY82 874 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 FAM186BQ8IYM0 893 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 TTC39CQ8N584 583 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 ANKRD52Q8NB46 1076 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 SLC4A11Q8NBS3 891 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 BAP1Q92560 729 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 NDRG1Q92597 394 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 EDEM1Q92611 657 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 SLC6A18Q96N87 628 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 FCRL3Q96P31 734 aaPredicted RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 UBXN6Q9BZV1 441 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 TMEM8AQ9HCN3 771 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 CISHQ9NSE2 258 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 FBXL12Q9NXK8 326 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 SERTAD1Q9UHV2 236 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 SCML1Q9UN30 329 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 TRAF3IP3Q9Y228 551 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 HBS1LQ9Y450 684 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 MUC22E2RYF6 1773 aaPredicted RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 A0A1W2PP55 124 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 TYW5A2RUC4 315 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 LRRC72A6NJI9 287 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 USP27XA6NNY8 438 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 TBL1XO60907 577 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 RNASEH2AO75792 299 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 LATS1O95835 1130 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 C1SP09871 688 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 RPL13P26373 211 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 CD70P32970 193 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 SGSHP51688 502 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 RAD23BP54727 409 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 GALCP54803 685 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 SFSWAPQ12872 951 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 TARDBPQ13148 414 aaKnown RBP eCLIP8.13□□□□□ -1.11
CLK1-215ENST00000621181 MPP7Q5T2T1 576 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 HES3Q5TGS1 186 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 BSPRYQ5W0U4 402 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 ARHGAP17Q68EM7 881 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 KRT39Q6A163 491 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 PM20D1Q6GTS8 502 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 RFWD3Q6PCD5 774 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 MFN1Q8IWA4 741 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 ZC3H3Q8IXZ2 948 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 ELOA2Q8IYF1 753 aaPredicted RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 SIX6OS1Q8N1H7 587 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.13□□□□□ -1.11
CLK1-215ENST00000621181 WFDC5Q8TCV5 224 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 PAGE5Q96GU1 130 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 OMDQ99983 421 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 ORAI3Q9BRQ5 295 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 NAT10Q9H0A0 1025 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 RSPH9Q9H1X1 276 aaPredicted RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 PABPC3Q9H361 631 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 MTG2Q9H4K7 406 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 GDF3Q9NR23 364 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 IMPACTQ9P2X3 320 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 HESX1Q9UBX0 185 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 SERGEFQ9UGK8 458 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 STOML2Q9UJZ1 356 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 COL5A1P20908 1838 aaPredicted RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 PLXNA2O75051 1894 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 YJEFN3A6XGL0 299 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 BECN2A8MW95 431 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 E7ENQ6 273 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 TULP2O00295 520 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 CAPN9O14815 690 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 XPO1O14980 1071 aaKnown RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 ATXN7O15265 892 aaPredicted RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 MID1O15344 667 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 YKT6O15498 198 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 ACTN4O43707 911 aaKnown RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 C1QL1O75973 258 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 TNNT1P13805 278 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 CD38P28907 300 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 PSMC2P35998 433 aaKnown RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 SLC11A2P49281 568 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 MXI1P50539 228 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 BST2Q10589 180 aaKnown RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 CST6Q15828 149 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 GOLGA7BQ2TAP0 167 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 KIAA0907Q7Z7F0 614 aaPredicted RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 ZNF605Q86T29 641 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 MMAAQ8IVH4 418 aaKnown RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 CCDC117Q8IWD4 279 aaPredicted RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 CCAR2Q8N163 923 aaKnown RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 EID2Q8N6I1 236 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 ZNF557Q8N988 423 aaPredicted RBP8.12□□□□□ -1.11
CLK1-215ENST00000621181 FBXL13Q8NEE6 735 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 FAXDC2Q96IV6 333 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 SERAC1Q96JX3 654 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 NRSN2Q9GZP1 204 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 NEUROG2Q9H2A3 272 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 ABCC13Q9NSE7 274 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 STIM2Q9P246 746 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 TSPAN16Q9UKR8 245 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 MAPK8IP1Q9UQF2 711 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 CEP83Q9Y592 693 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 PAXBP1Q9Y5B6 917 aa8.12□□□□□ -1.11
CLK1-215ENST00000621181 MYLKQ15746 1914 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 IRAK2O43187 625 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms