RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CCAR2Q8N163 923 aaKnown RBP10.86□□□□□ -0.67
CCDC9-203ENST00000596938 NEK11Q8NG66 645 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 C1orf74Q96LT6 269 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 SPAG5Q96R06 1193 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 PCED1AQ9H1Q7 454 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 RSPH9Q9H1X1 276 aaPredicted RBP10.86□□□□□ -0.67
CCDC9-203ENST00000596938 NLRC4Q9NPP4 1024 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 CD93Q9NPY3 652 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 TMEM9BQ9NQ34 198 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 PIGVQ9NUD9 493 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 COX16Q9P0S2 106 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 ERVW-1Q9UQF0 538 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 HS3ST4Q9Y661 456 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 TARSL2A2RTX5 802 aaKnown RBP10.85□□□□□ -0.67
CCDC9-203ENST00000596938 METTL12A8MUP2 240 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 PAGE1O75459 146 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 CLDN11O75508 207 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 ENDOD1O94919 500 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 ADCY5O95622 1261 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 TFE3P19532 575 aaPredicted RBP10.85□□□□□ -0.67
CCDC9-203ENST00000596938 RPS14P62263 151 aaKnown RBP10.85□□□□□ -0.67
CCDC9-203ENST00000596938 FMO1Q01740 532 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 DEUP1Q05D60 604 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 GFPT1Q06210 699 aaPredicted RBP10.85□□□□□ -0.67
CCDC9-203ENST00000596938 SULT2A1Q06520 285 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 PPM1JQ5JR12 505 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 C9orf64Q5T6V5 341 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 FAM102AQ5T9C2 384 aaPredicted RBP10.85□□□□□ -0.67
CCDC9-203ENST00000596938 OTUD1Q5VV17 481 aaPredicted RBP10.85□□□□□ -0.67
CCDC9-203ENST00000596938 NAA35Q5VZE5 725 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 TRIM72Q6ZMU5 477 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 SND1Q7KZF4 910 aaKnown RBP eCLIP10.85□□□□□ -0.67
CCDC9-203ENST00000596938 BNIPLQ7Z465 357 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 APCDD1Q8J025 514 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 ZNF366Q8N895 744 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 SLC20A1Q8WUM9 679 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 IGSF8Q969P0 613 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 ALG14Q96F25 216 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 PCMTD1Q96MG8 357 aaPredicted RBP10.85□□□□□ -0.67
CCDC9-203ENST00000596938 HSPA12BQ96MM6 686 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 RPRD1AQ96P16 312 aaPredicted RBP10.85□□□□□ -0.67
CCDC9-203ENST00000596938 GPR174Q9BXC1 333 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 ADAM33Q9BZ11 813 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 TKTL2Q9H0I9 626 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 CAPN10Q9HC96 672 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 SUSD2Q9UGT4 822 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 SLCO3A1Q9UIG8 710 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 SCML1Q9UN30 329 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 TBC1D30Q9Y2I9 924 aa10.85□□□□□ -0.67
CCDC9-203ENST00000596938 ITIH6Q6UXX5 1313 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 ABCA7Q8IZY2 2146 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.84□□□□□ -0.67
CCDC9-203ENST00000596938 DRGXA6NNA5 263 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 SMTNL1A8MU46 457 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 I6L893 689 aaPredicted RBP10.84□□□□□ -0.67
CCDC9-203ENST00000596938 RNASEH1O60930 286 aaKnown RBP10.84□□□□□ -0.67
CCDC9-203ENST00000596938 DNTTP04053 509 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 CFIP05156 583 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 UNGP13051 313 aaPredicted RBP10.84□□□□□ -0.67
CCDC9-203ENST00000596938 ATP1A3P13637 1013 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 GNSP15586 552 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 ENGP17813 658 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 FLT3P36888 993 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 NNMTP40261 264 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 CTSOP43234 321 aaPredicted RBP10.84□□□□□ -0.67
CCDC9-203ENST00000596938 SULT1E1P49888 294 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 CDH4P55283 916 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 SFSWAPQ12872 951 aaKnown RBP10.84□□□□□ -0.67
CCDC9-203ENST00000596938 ZNF177Q13360 481 aaPredicted RBP10.84□□□□□ -0.67
CCDC9-203ENST00000596938 ANO6Q4KMQ2 910 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 C2CD6Q53TS8 623 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 ZNF776Q68DI1 518 aaPredicted RBP10.84□□□□□ -0.67
CCDC9-203ENST00000596938 CXorf57Q6NSI4 855 aaKnown RBP10.84□□□□□ -0.67
CCDC9-203ENST00000596938 C14orf80Q86SX3 495 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 ZNF683Q8IZ20 524 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 RGL4Q8IZJ4 473 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 AOPEPQ8N6M6 819 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 HAPLN3Q96S86 360 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 TBCBQ99426 244 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 FEM1AQ9BSK4 669 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 SIK2Q9H0K1 926 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 ANLNQ9NQW6 1124 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 VANGL2Q9ULK5 521 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 OR51B4Q9Y5P0 310 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 EML5Q05BV3 1969 aa10.84□□□□□ -0.67
CCDC9-203ENST00000596938 MYO18AQ92614 2054 aaKnown RBP10.84□□□□□ -0.67
CCDC9-203ENST00000596938 EDDM13A0A1B0GTR0 161 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 TTC34A8MYJ7 566 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 UPK3BL1B0FP48 263 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 UPK3BL2E5RIL1 263 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 GOLGA8SH3BPF8 625 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 ARHGAP33O14559 1287 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 SIN3BO75182 1162 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 KCNK5O95279 499 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 SYPP08247 313 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 ADRB1P08588 477 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 CCDC172P0C7W6 258 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 PDGFRAP16234 1089 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 CSRP1P21291 193 aaKnown RBP10.83□□□□□ -0.68
CCDC9-203ENST00000596938 MZF1P28698 734 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 755 ms