RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SSU72P8A0A1W2PR75 194 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 TMEM191CA6NGB0 347 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 E9PAM4 449 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 HRO43593 1189 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 MFAP3LO75121 409 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 RNF8O76064 485 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 SRPRAP08240 638 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 PLEKP08567 350 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 FAM228BP0C875 321 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 PSMA2P25787 234 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 EIF4A3P38919 411 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 NNMTP40261 264 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 IL12RB1P42701 662 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 MRE11P49959 708 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 PLK1P53350 603 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 HDAC4P56524 1084 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 NRG1Q02297 640 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 PLEKHG6Q3KR16 790 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 FSCBQ5H9T9 825 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 PITRM1Q5JRX3 1037 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 RNF219Q5W0B1 726 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 KDM1BQ8NB78 822 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 FNIP1Q8TF40 1166 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 HMGB4Q8WW32 186 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 ZYG11BQ9C0D3 744 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 ABHD10Q9NUJ1 306 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 PPARGC1AQ9UBK2 798 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 OR12D3Q9UGF7 316 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 IGLV3-10A0A075B6K4 115 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 A0A1W2PQF6 199 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 PRR23AA6NEV1 266 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 WASH3PC4AMC7 463 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 ATMINO43313 823 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 GFRA3O60609 400 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 EPHX1P07099 455 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 GGCXP38435 758 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 CSKP41240 450 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 ADKP55263 362 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 SCAPQ12770 1279 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 FUT11Q495W5 492 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 EFHC2Q5JST6 749 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 C6orf118Q5T5N4 469 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 PRR23BQ6ZRT6 265 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 SETD3Q86TU7 594 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 ALYREFQ86V81 257 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 CIR1Q86X95 450 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 MDGA1Q8NFP4 955 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 CYB5D2Q8WUJ1 264 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 SORCS1Q8WY21 1168 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 MRFAP1L1Q96HT8 127 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 SPACA7Q96KW9 195 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 CCDC42Q96M95 316 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 TMPRSS4Q9NRS4 437 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 SMG5Q9UPR3 1016 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 TBC1D30Q9Y2I9 924 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 SNX10Q9Y5X0 201 aa17.79■□□□□ 0.44
SHKBP1-212ENST00000596163 I6L893 689 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 AKR1B10O60218 316 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 ZNF217O75362 1048 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 RHOCP08134 193 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 ZNF75DP51815 510 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 ECT2LQ008S8 904 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 TBX2Q13207 712 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 ACAP1Q15027 740 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 SLC18A3Q16572 532 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 CXorf57Q6NSI4 855 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 DNAAF5Q86Y56 855 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 ZNF683Q8IZ20 524 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 SUMF1Q8NBK3 374 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 TPSD1Q9BZJ3 242 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 FBRSQ9HAH7 460 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 INTS6Q9UL03 887 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 ERVW-1Q9UQF0 538 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 RAD54BQ9Y620 910 aa17.78■□□□□ 0.44
SHKBP1-212ENST00000596163 EIF3CLB5ME19 914 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 AP5Z1O43299 807 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 CNTN5O94779 1100 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 RHOBTB1O94844 696 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 OR1E1P30953 314 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 HOXC13P31276 330 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 KRT83P78385 493 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 PTPRNQ16849 979 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 RAB6CQ53S08 254 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 ALFQ53S48 1182 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 LAIR1Q6GTX8 287 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 KIAA1211LQ6NV74 962 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 RWDD4Q6NW29 188 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 ZNF783Q6ZMS7 281 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 GAS2L3Q86XJ1 694 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 APCDD1Q8J025 514 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 CCDC185Q8N715 623 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 TBC1D31Q96DN5 1066 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 EIF3CQ99613 913 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 FEM1AQ9BSK4 669 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 RAB6CQ9H0N0 254 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 THAP2Q9H0W7 228 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 MUC3BQ9H195 1237 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 TMEM245Q9H330 911 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 MPP6Q9NZW5 540 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms