RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 PATE3B3GLJ2 98 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 AP5Z1O43299 807 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 F9P00740 461 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 AASDHQ4L235 1098 aaPredicted RBP23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 RAB6CQ53S08 254 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 RABGAP1LQ5R372 815 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 ARTNQ5T4W7 220 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 TTC39BQ5VTQ0 682 aaPredicted RBP23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 CXorf57Q6NSI4 855 aaKnown RBP23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 SLC41A1Q8IVJ1 513 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 CCDC117Q8IWD4 279 aaPredicted RBP23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 ZNF683Q8IZ20 524 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 C12orf50Q8NA57 414 aaPredicted RBP23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 OR52K2Q8NGK3 314 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 PIGKQ92643 395 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 SIPA1Q96FS4 1042 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 RPRD1AQ96P16 312 aaPredicted RBP23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 AGPAT1Q99943 283 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 SIK2Q9H0K1 926 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 RAB6CQ9H0N0 254 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 MTG2Q9H4K7 406 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 CBX8Q9HC52 389 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 CDV3Q9UKY7 258 aaKnown RBP23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 ERVW-1Q9UQF0 538 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 SNX10Q9Y5X0 201 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 SLC30A4O14863 429 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 ENDOD1O94919 500 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 GJB6O95452 261 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 ASLP04424 464 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 SDHBP21912 280 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 MZF1P28698 734 aaPredicted RBP23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 TPMTP51580 245 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 GSCP56915 257 aaPredicted RBP23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 IRF2BP2Q7Z5L9 587 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 CACUL1Q86Y37 369 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 PHF13Q86YI8 300 aaPredicted RBP23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 JOSD2Q8TAC2 188 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 PRCCQ92733 491 aaPredicted RBP23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 SYT11Q9BT88 431 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 WSB2Q9NYS7 404 aaPredicted RBP23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 NUMA1Q14980 2115 aa23.02■■□□□ 1.28
GTF2F1-204ENST00000594965 IGLV3-19P01714 112 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 PDGFRAP16234 1089 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 FERP16591 822 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 ITPKAP23677 461 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 CD6P30203 668 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 NUMBP49757 651 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 PLK1P53350 603 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 ZNF33AQ06730 810 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 SLC12A1Q13621 1099 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 NR1I3Q14994 352 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 PEAR1Q5VY43 1037 aaPredicted RBP23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 LYSMD4Q5XG99 296 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 SND1Q7KZF4 910 aaKnown RBP eCLIP23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 LUZP1Q86V48 1076 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 ALG14Q96F25 216 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 ZNF419Q96HQ0 510 aaPredicted RBP23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 RTKNQ9BST9 563 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 ADAM22Q9P0K1 906 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 SUN2Q9UH99 717 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 PILRBQ9UKJ0 227 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 MYO6Q9UM54 1294 aa23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 ATXN2Q99700 1313 aaKnown RBP23.01■■□□□ 1.27
GTF2F1-204ENST00000594965 PCDH15Q96QU1 1955 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 A0A1W2PQC6 194 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 CNTN5O94779 1100 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 MOCS3O95396 460 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 SRPRAP08240 638 aaKnown RBP23■■□□□ 1.27
GTF2F1-204ENST00000594965 RDXP35241 583 aaKnown RBP23■■□□□ 1.27
GTF2F1-204ENST00000594965 NSFP46459 744 aaKnown RBP23■■□□□ 1.27
GTF2F1-204ENST00000594965 LIMK1P53667 647 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 CCDC14Q49A88 953 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 FILIP1LQ4L180 1135 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 ALFQ53S48 1182 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 SH3PXD2AQ5TCZ1 1133 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 MON1BQ7L1V2 547 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 SYT12Q8IV01 421 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 KDM1BQ8NB78 822 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 RXFP2Q8WXD0 754 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 TOE1Q96GM8 510 aaKnown RBP23■■□□□ 1.27
GTF2F1-204ENST00000594965 SLCO3A1Q9UIG8 710 aa23■■□□□ 1.27
GTF2F1-204ENST00000594965 TCRBV5S1A1TA0A578 114 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 LNP1A1A4G5 178 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 C2CD4BA6NLJ0 364 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 LRRC53A6NM62 1247 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 RPS14P62263 151 aaKnown RBP22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 ATP11AP98196 1134 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 ECT2LQ008S8 904 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 ARID5BQ14865 1188 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 C15orf59Q2T9L4 293 aaPredicted RBP22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 HNRNPA1L2Q32P51 320 aaKnown RBP22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 ERMP1Q7Z2K6 904 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 DGLUCYQ7Z3D6 616 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 FAM131BQ86XD5 332 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 RPL10LQ96L21 214 aaKnown RBP22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 C1orf74Q96LT6 269 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 TTYH3Q9C0H2 523 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 SEPT11Q9NVA2 429 aaKnown RBP22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 TMEM51Q9NW97 253 aa22.99■■□□□ 1.27
GTF2F1-204ENST00000594965 TBC1D30Q9Y2I9 924 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms