RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 DONSONQ9NYP3 566 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 MPP6Q9NZW5 540 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 ATG2AQ2TAZ0 1938 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 DRGXA6NNA5 263 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 F5H5T6 163 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 CCL16O15467 120 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 MTSS1O43312 755 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 OPHN1O60890 802 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 CNTN5O94779 1100 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 CORO1AP31146 461 aaKnown RBP11.71□□□□□ -0.53
SMAD4-205ENST00000588745 HOXA9P31269 272 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 MAGEA6P43360 314 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 SLC11A2P49281 568 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 WASHC5Q12768 1159 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 C5orf22Q49AR2 442 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 FAM133BQ5BKY9 247 aaKnown RBP11.71□□□□□ -0.53
SMAD4-205ENST00000588745 ANKRD20A2Q5SQ80 823 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 ANKRD20A1Q5TYW2 823 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 ANKRD20A3Q5VUR7 823 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 TXNDC8Q6A555 127 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 LRIG3Q6UXM1 1119 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 GAREM2Q75VX8 874 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 TRMT10CQ7L0Y3 403 aaKnown RBP11.71□□□□□ -0.53
SMAD4-205ENST00000588745 RELL1Q8IUW5 271 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 IQCKQ8N0W5 287 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 UMODL1-AS1Q8N2C9 162 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 ATPAF2Q8N5M1 289 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 SLC22A17Q8WUG5 538 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 IGSF8Q969P0 613 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.53
SMAD4-205ENST00000588745 PWWP2AQ96N64 755 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 RPRD1AQ96P16 312 aaPredicted RBP11.71□□□□□ -0.53
SMAD4-205ENST00000588745 ZIM3Q96PE6 472 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 RUFY1Q96T51 708 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 EPB41L4BQ9H329 900 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 PABPC3Q9H361 631 aaKnown RBP11.71□□□□□ -0.53
SMAD4-205ENST00000588745 NDFIP2Q9NV92 336 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 SEPT10Q9P0V9 454 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 PLAAQ9Y263 795 aa11.71□□□□□ -0.53
SMAD4-205ENST00000588745 NYNRINQ9P2P1 1898 aaKnown RBP11.71□□□□□ -0.53
SMAD4-205ENST00000588745 GOLGA6L7A0A1B0GV03 622 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 TCRBV7S3A2A0A539 114 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 AGPSO00116 658 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 DFFAO00273 331 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 METTL18O95568 372 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 LATS1O95835 1130 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 NUDT17P0C025 328 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 IRF1P10914 325 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 MYL4P12829 197 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 EPCAMP16422 314 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 PTPN3P26045 913 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 SLC6A4P31645 630 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 FDFT1P37268 417 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 PBX2P40425 430 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 MAPKAPK2P49137 400 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 EPHA5P54756 1037 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 ARL4CP56559 192 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 FAM193AP78312 1265 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 SEMA5AQ13591 1074 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 HIF1AQ16665 826 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 ALFQ53S48 1182 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 FAM182AQ5T1J6 154 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 COL13A1Q5TAT6 717 aaPredicted RBP11.7□□□□□ -0.54
SMAD4-205ENST00000588745 FAXCQ5TGI0 409 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 CENPUQ71F23 418 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 TFAP2DQ7Z6R9 452 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 DENND1CQ8IV53 801 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 LGI2Q8N0V4 545 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 ZNF567Q8N184 647 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 DEPDC1BQ8WUY9 529 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 EXOC4Q96A65 974 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 TSGA13Q96PP4 275 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 SLC22A12Q96S37 553 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 RBM15Q96T37 977 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMAD4-205ENST00000588745 GDF15Q99988 308 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 CORO1BQ9BR76 489 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 PBX4Q9BYU1 374 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 CEP41Q9BYV8 373 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 SLC39A8Q9C0K1 460 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 ATXN3LQ9H3M9 355 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 SEMA4AQ9H3S1 761 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 GKN1Q9NS71 199 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 DNAJC17Q9NVM6 304 aaKnown RBP11.7□□□□□ -0.54
SMAD4-205ENST00000588745 SMPD4Q9NXE4 827 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 OGFRQ9NZT2 677 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 ZNF212Q9UDV6 495 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 CPQQ9Y646 472 aa11.7□□□□□ -0.54
SMAD4-205ENST00000588745 HELZP42694 1942 aaKnown RBP11.7□□□□□ -0.54
SMAD4-205ENST00000588745 A0A1W2PRU2 124 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 H3BQF6 201 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 GOLGA8MH3BSY2 632 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 KCNK1O00180 336 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 EIF3HO15372 352 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMAD4-205ENST00000588745 RIPK2O43353 540 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 RFPL2O75678 378 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 FGF19O95750 216 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 KLKB1P03952 638 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 CKMP06732 381 aa11.69□□□□□ -0.54
SMAD4-205ENST00000588745 HNRNPA1P09651 372 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMAD4-205ENST00000588745 PFKLP17858 780 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms