RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 LTFP02788 710 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 CD1EP15812 388 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 MAXP61244 160 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 CCNA1P78396 465 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 ZBTB46Q86UZ6 589 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 IFNEQ86WN2 208 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 ACVR1CQ8NER5 493 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 GPRC5AQ8NFJ5 357 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 KCTD4Q8WVF5 259 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 SNX15Q9NRS6 342 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 THAP1Q9NVV9 213 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 PFKMP08237 780 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 GSTA2P09210 222 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 PIRTP0C851 137 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 BLMHQ13867 455 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 KBTBD2Q8IY47 623 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.98□□□□□ -0.17
NDEL1-204ENST00000578172 B3GALT6Q96L58 329 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 TUBB6Q9BUF5 446 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 FSD1LQ9BXM9 530 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 BCO2Q9BYV7 579 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 A0A0A0MRY4 1105 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 PDHXO00330 501 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 ABLIM1O14639 778 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 MAGEB2O15479 319 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 TREHO43280 583 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 GPC4O75487 556 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 SMNDC1O75940 238 aaKnown RBP eCLIP13.97□□□□□ -0.17
NDEL1-204ENST00000578172 B3GAT3O94766 335 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 HNRNPCP07910 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
NDEL1-204ENST00000578172 TAF6P49848 677 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 MRPS35P82673 323 aaKnown RBP13.97□□□□□ -0.17
NDEL1-204ENST00000578172 CCDC15Q0P6D6 951 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 NOTUMQ6P988 496 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 CYP2R1Q6VVX0 501 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 SLC41A1Q8IVJ1 513 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 TDRD5Q8NAT2 981 aaKnown RBP13.97□□□□□ -0.17
NDEL1-204ENST00000578172 ICA1LQ8NDH6 482 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 FNIP1Q8TF40 1166 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 ELMO2Q96JJ3 720 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 SPATA13Q96N96 652 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 PIF1Q9H611 641 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 SOX13Q9UN79 622 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 NRXN2Q9P2S2 1712 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 MSI1O43347 362 aaKnown RBP13.97□□□□□ -0.17
NDEL1-204ENST00000578172 SPAG6O75602 509 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 SEC24DO94855 1032 aaPredicted RBP13.97□□□□□ -0.17
NDEL1-204ENST00000578172 PEX2P28328 305 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 MPP3Q13368 585 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 SH2D4BQ5SQS7 431 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 NCBP2-AS2Q69YL0 99 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 PLPPR4Q7Z2D5 763 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 B4GALNT2Q8NHY0 566 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 CERS2Q96G23 380 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 PCDHA11Q9Y5I1 949 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 YJEFN3A6XGL0 299 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 E7ENQ6 273 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 SLC25A27O95847 323 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 LINGO3P0C6S8 592 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 BDNFP23560 247 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 EFHC1Q5JVL4 640 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 DENND6AQ8IWF6 608 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 UBR7Q8N806 425 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 CDRT15Q96T59 188 aa13.97□□□□□ -0.17
NDEL1-204ENST00000578172 ZNF184Q99676 751 aaPredicted RBP13.97□□□□□ -0.17
NDEL1-204ENST00000578172 SMIM28A0A1B0GU29 152 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 KIF3CO14782 793 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 NRP1O14786 923 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 SIN3BO75182 1162 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 GLRA3O75311 464 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 PIGNO95427 931 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 ALDOAP04075 364 aaKnown RBP13.96□□□□□ -0.17
NDEL1-204ENST00000578172 ETV4P43268 484 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 SOX4Q06945 474 aaPredicted RBP13.96□□□□□ -0.17
NDEL1-204ENST00000578172 CSHL1Q14406 222 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 MAP7D1Q3KQU3 841 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 SLC9B1Q4ZJI4 515 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 C9orf57Q5W0N0 161 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 CDCA2Q69YH5 1023 aaPredicted RBP13.96□□□□□ -0.17
NDEL1-204ENST00000578172 EXOC8Q8IYI6 725 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 DIS3LQ8TF46 1054 aaKnown RBP13.96□□□□□ -0.17
NDEL1-204ENST00000578172 SKA1Q96BD8 255 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 C12orf42Q96LP6 360 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 TKTL2Q9H0I9 626 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 EBF3Q9H4W6 596 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 WDCPQ9H6R7 721 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 KCNK4Q9NYG8 393 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 YBX3P16989 372 aaKnown RBP eCLIP13.96□□□□□ -0.17
NDEL1-204ENST00000578172 CHRNA4P43681 627 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 PRAMEP78395 509 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 DSG1Q02413 1049 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 ARHGAP1Q07960 439 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 PDK1Q15118 436 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 ZNF484Q5JVG2 852 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 OR52B2Q96RD2 323 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 COG4Q9H9E3 785 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 COPS7BQ9H9Q2 264 aaPredicted RBP13.96□□□□□ -0.17
NDEL1-204ENST00000578172 PIGVQ9NUD9 493 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 NOD1Q9Y239 953 aa13.96□□□□□ -0.17
NDEL1-204ENST00000578172 NME7Q9Y5B8 376 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms