RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 PRPSAP2O60256 369 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 MTA2O94776 668 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 PROSCO94903 275 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 HNRNPLP14866 589 aaKnown RBP eCLIP12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 MZF1P28698 734 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 HOXC13P31276 330 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 PLK1P53350 603 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 SATB1Q01826 763 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 SEMA3BQ13214 749 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 CA9Q16790 459 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 EGFLAMQ63HQ2 1017 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 MBLAC2Q68D91 279 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 TXNRD3NBQ6F5E7 133 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 SYT13Q7L8C5 426 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 CPNE8Q86YQ8 564 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 RHOT2Q8IXI1 618 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 APCDD1Q8J025 514 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 AHI1Q8N157 1196 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 CCDC33Q8N5R6 958 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 ALLCQ8N6M5 410 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 ZNF513Q8N8E2 541 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 TXNDC5Q8NBS9 432 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 WFIKKN2Q8TEU8 576 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 SORCS1Q8WY21 1168 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 RFFLQ8WZ73 363 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 TTC17Q96AE7 1141 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 ALG14Q96F25 216 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 ACOX2Q99424 681 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 SNRNP25Q9BV90 132 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 ZYG11BQ9C0D3 744 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 GPATCH2LQ9NWQ4 482 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 NEU3Q9UQ49 428 aa12.3□□□□□ -0.44
RABGGTA-218ENST00000560777 WASH3PC4AMC7 463 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 SGK1O00141 431 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 LAMTOR5O43504 91 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 CREB3O43889 395 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 ADAM23O75077 832 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 KLF8O95600 359 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 CSKP41240 450 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 ARHGAP25P42331 645 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 CCR3P51677 355 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 SLC12A1Q13621 1099 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 MESDQ14696 234 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 EIF4HQ15056 248 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 ANGPT1Q15389 498 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 FUT11Q495W5 492 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 HSF5Q4G112 596 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 BOLA3Q53S33 107 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 PITRM1Q5JRX3 1037 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 RWDD4Q6NW29 188 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 TFAP2DQ7Z6R9 452 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 SETD3Q86TU7 594 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 NLRP14Q86W24 1093 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 PSTKQ8IV42 348 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 LRRC8AQ8IWT6 810 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 ACRBPQ8NEB7 543 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 PRSS33Q8NF86 280 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 TBC1D31Q96DN5 1066 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 FEM1AQ9BSK4 669 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 CIPCQ9C0C6 399 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 DHX35Q9H5Z1 703 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 RETREG1Q9H6L5 497 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 PRMT8Q9NR22 394 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 THAP10Q9P2Z0 257 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 LCMT1Q9UIC8 334 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 MMP17Q9ULZ9 603 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 AP4E1Q9UPM8 1137 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 OR51B4Q9Y5P0 310 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 DOCK4Q8N1I0 1966 aa12.29□□□□□ -0.44
RABGGTA-218ENST00000560777 K7ESF4 209 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 PAPSS2O95340 614 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 ATP5BP06576 529 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 RARAP10276 462 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 TDGF1P13385 188 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 RHOQP17081 205 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 POLR2EP19388 210 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 EPHB2P29323 1055 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 OR1E1P30953 314 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 NTSR1P30989 418 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 WASP42768 502 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 HADHBP55084 474 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 OXCT1P55809 520 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 SLC25A11Q02978 314 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 CSTF1Q05048 431 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 TCF15Q12870 199 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 ENPP2Q13822 863 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 DMC1Q14565 340 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 ZNF234Q14588 700 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 CRY1Q16526 586 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 PTPRNQ16849 979 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 SMTNL2Q2TAL5 461 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 PLEKHG6Q3KR16 790 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 KCNT1Q5JUK3 1230 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 RNF219Q5W0B1 726 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 TSSK4Q6SA08 328 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 CHPFQ8IZ52 775 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 CYB5D2Q8WUJ1 264 aa12.28□□□□□ -0.44
RABGGTA-218ENST00000560777 UCMAQ8WVF2 138 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms