RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 METTL18O95568 372 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 TNNT1P13805 278 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 CAPN3P20807 821 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 ABCD3P28288 659 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 PGM1P36871 562 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 RUNDC3AQ59EK9 446 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 ACAD10Q6JQN1 1059 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 MTFR2Q6P444 385 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 ZNF474Q6S9Z5 364 aaPredicted RBP5.7□□□□□ -1.5
SYNE2-210ENST00000553455 OLFML1Q6UWY5 402 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 CLEC4GQ6UXB4 293 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 MDGA2Q7Z553 956 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 TBC1D1Q86TI0 1168 aaPredicted RBP5.7□□□□□ -1.5
SYNE2-210ENST00000553455 GPR150Q8NGU9 434 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 RNF125Q96EQ8 232 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 FUZQ9BT04 418 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 NUAK2Q9H093 628 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 MAP3K20Q9NYL2 800 aaKnown RBP5.7□□□□□ -1.5
SYNE2-210ENST00000553455 PKP3Q9Y446 797 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 HEMK1Q9Y5R4 338 aaPredicted RBP5.7□□□□□ -1.5
SYNE2-210ENST00000553455 CYP46A1Q9Y6A2 500 aa5.7□□□□□ -1.5
SYNE2-210ENST00000553455 POC1B-GALNT4F8VUJ3 575 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 ANP32CO43423 234 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 C1QL1O75973 258 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 WEE2P0C1S8 567 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 GPD1P21695 349 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 TGM2P21980 687 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 SOX2P48431 317 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 ADPRHP54922 357 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 COL10A1Q03692 680 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 TBL3Q12788 808 aaKnown RBP5.69□□□□□ -1.5
SYNE2-210ENST00000553455 KLF10Q13118 480 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 ALKBH1Q13686 389 aaKnown RBP5.69□□□□□ -1.5
SYNE2-210ENST00000553455 SEMA3AQ14563 771 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 SEC23BQ15437 767 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 PRICKLE4Q2TBC4 344 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 GXYLT1Q4G148 440 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 HYIQ5T013 277 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 AKNAD1Q5T1N1 836 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 FAAH2Q6GMR7 532 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 RANBP10Q6VN20 620 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 RNF144BQ7Z419 303 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 MRGPRGQ86SM5 289 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 GGNQ86UU5 652 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 CHSY1Q86X52 802 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 C2CD4CQ8TF44 421 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 RFFLQ8WZ73 363 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 ELP4Q96EB1 424 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 ZNF347Q96SE7 839 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 CLSTN3Q9BQT9 956 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 ABHD14AQ9BUJ0 271 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 PRDM13Q9H4Q3 707 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 MROH8Q9H579 483 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 TXNRD2Q9NNW7 524 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 MLXIPLQ9NP71 852 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 ARPP21Q9UBL0 812 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-210ENST00000553455 HDAC6Q9UBN7 1215 aa5.69□□□□□ -1.5
SYNE2-210ENST00000553455 SH2D7A6NKC9 451 aaPredicted RBP5.68□□□□□ -1.5
SYNE2-210ENST00000553455 MCIDASD6RGH6 385 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 DSCR3O14972 297 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 RAMP2O60895 175 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 ENO1P06733 434 aaKnown RBP5.68□□□□□ -1.5
SYNE2-210ENST00000553455 CHRM5P08912 532 aaPredicted RBP5.68□□□□□ -1.5
SYNE2-210ENST00000553455 PKMP14618 531 aaKnown RBP5.68□□□□□ -1.5
SYNE2-210ENST00000553455 GGT5P36269 586 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 ACVRL1P37023 503 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 CLK3P49761 638 aaKnown RBP5.68□□□□□ -1.5
SYNE2-210ENST00000553455 CASP6P55212 293 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 TDGQ13569 410 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 GPR68Q15743 365 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 GPR162Q16538 588 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 PROSER3Q2NL68 480 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 GLE1Q53GS7 698 aaKnown RBP5.68□□□□□ -1.5
SYNE2-210ENST00000553455 SH2D4BQ5SQS7 431 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 CC2D1BQ5T0F9 858 aaKnown RBP5.68□□□□□ -1.5
SYNE2-210ENST00000553455 H1FNTQ75WM6 255 aaPredicted RBP5.68□□□□□ -1.5
SYNE2-210ENST00000553455 GALNT7Q86SF2 657 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 TMEM200AQ86VY9 491 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 RHPN2Q8IUC4 686 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 VPS52Q8N1B4 723 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 HDAC2Q92769 488 aaKnown RBP5.68□□□□□ -1.5
SYNE2-210ENST00000553455 TRIM31Q9BZY9 425 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 TRIM2Q9C040 744 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 SEMA4GQ9NTN9 838 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 ING1Q9UK53 422 aaPredicted RBP5.68□□□□□ -1.5
SYNE2-210ENST00000553455 WNT6Q9Y6F9 365 aa5.68□□□□□ -1.5
SYNE2-210ENST00000553455 UBE2Q2LH0YL09 131 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 SMIM22K7EJ46 135 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 SYN3O14994 580 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 BAIAP3O94812 1187 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 SGPL1O95470 568 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 F9P00740 461 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 CYP4B1P13584 511 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 PTH2RP49190 550 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 RPS6KA3P51812 740 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 ARHGAP8P85298 464 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 NFIL3Q16649 462 aa5.67□□□□□ -1.5
SYNE2-210ENST00000553455 GPATCH4Q5T3I0 446 aaKnown RBP5.67□□□□□ -1.5
SYNE2-210ENST00000553455 UBAP2Q5T6F2 1119 aaKnown RBP5.67□□□□□ -1.5
SYNE2-210ENST00000553455 NAA35Q5VZE5 725 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms