RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FAM90A2PQ658T7 463 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 RETSATQ6NUM9 610 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 B3GNT9Q6UX72 402 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 GDPD4Q6W3E5 623 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 Q6ZSV7 163 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 MAEAQ7L5Y9 396 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 KDELC2Q7Z4H8 507 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 FAM185AQ8N0U4 392 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 NAGSQ8N159 534 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 LYG1Q8N1E2 194 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 SDR16C5Q8N3Y7 309 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 PAQR4Q8N4S7 273 aaPredicted RBP0.96□□□□□ -2.26
COPB1-212ENST00000534771 ANKRD44Q8N8A2 993 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 IL17RCQ8NAC3 791 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 KDM1BQ8NB78 822 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 SPATA20Q8TB22 786 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 OVCA2Q8WZ82 227 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 KAT2AQ92830 837 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 CD101Q93033 1021 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 ADGRG7Q96K78 797 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 SLC25A33Q9BSK2 321 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 SPC25Q9HBM1 224 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 TCF7L1Q9HCS4 588 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 TMEM248Q9NWD8 314 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 STK32BQ9NY57 414 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 RGS17Q9UGC6 210 aaPredicted RBP0.96□□□□□ -2.26
COPB1-212ENST00000534771 ITGB1BP2Q9UKP3 347 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 TPCN1Q9ULQ1 816 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 TNFSF13BQ9Y275 285 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 ADAM18Q9Y3Q7 739 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 SLC4A4Q9Y6R1 1079 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 LMTK3Q96Q04 1460 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 FAM172BPA6NC97 362 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 MAGEA13PA6NCF6 341 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 PRAC2D3DTV9 90 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 STMND1H3BQB6 276 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 SYT5O00445 386 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 CLGNO14967 610 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 MSI1O43347 362 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 CCNT2O60583 730 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 CBFA2T3O75081 653 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 PPP6R2O75170 966 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 COQ9O75208 318 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 SERPINI2O75830 405 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 NEURL1O76050 574 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 IL18RAPO95256 599 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 BRAFP15056 766 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 NAGAP17050 411 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 CHRNA5P30532 468 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 TNFSF8P32971 234 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 PEX5P50542 639 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 EVA1CP58658 441 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 KRTAP12-2P59991 146 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 RPS16P62249 146 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 RBM6P78332 1123 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 PMP22Q01453 160 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 GALNT3Q14435 633 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 HNF4GQ14541 408 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 RBBP5Q15291 538 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 CNGA2Q16280 664 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 PLEKHO1Q53GL0 409 aaPredicted RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 EFHC1Q5JVL4 640 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 IFIT1BQ5T764 474 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 TLDC1Q6P9B6 456 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 AAGABQ6PD74 315 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 UNC13DQ70J99 1090 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 SMIM29Q86T20 159 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 IGFN1Q86VF2 1251 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 KRTAP7-1Q8IUC3 87 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 SPAG16Q8N0X2 631 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 CLASRPQ8N2M8 674 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 SLC25A41Q8N5S1 370 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 MAB21L3Q8N8X9 362 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 BICD2Q8TD16 824 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 NEK9Q8TD19 979 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 LRRC8CQ8TDW0 803 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 ZNF419Q96HQ0 510 aaPredicted RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 APOLD1Q96LR9 279 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 IL17FQ96PD4 163 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 WDR24Q96S15 920 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 SMAD5Q99717 465 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 PYGO2Q9BRQ0 406 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 DCTN5Q9BTE1 182 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 SORBS1Q9BX66 1292 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 B3GNT4Q9C0J1 378 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 MMP28Q9H239 520 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 SLC25A32Q9H2D1 315 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 SLC12A5Q9H2X9 1139 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 EVA1AQ9H8M9 152 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 SFXN1Q9H9B4 322 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 IL21RQ9HBE5 538 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 ATP6V0A4Q9HBG4 840 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 PNRC2Q9NPJ4 139 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 RNF146Q9NTX7 359 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 TBC1D23Q9NUY8 699 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 MTPAPQ9NVV4 582 aaKnown RBP eCLIP0.95□□□□□ -2.26
COPB1-212ENST00000534771 TMOD4Q9NZQ9 345 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 MALT1Q9UDY8 824 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 AFF4Q9UHB7 1163 aaKnown RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 TCF19Q9Y242 345 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms