RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 DCAKDQ8WVC6 231 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 EDEM1Q92611 657 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 TUBGCP5Q96RT8 1024 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 SMOQ99835 787 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 CYLDQ9NQC7 956 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 XPNPEP3Q9NQH7 507 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 DNAJB4Q9UDY4 337 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 ZC3H7BQ9UGR2 993 aaKnown RBP11.87□□□□□ -0.51
USP35-207ENST00000530546 PADI3Q9ULW8 664 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 MGEA5O60502 916 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 KPNA6O60684 536 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 B3GAT3O94766 335 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 INHBAP08476 426 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 ZCCHC18P0CG32 403 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 VAV1P15498 845 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 ELNP15502 786 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 ZFXP17010 805 aaPredicted RBP11.87□□□□□ -0.51
USP35-207ENST00000530546 NOS2P35228 1153 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 BRCC3P46736 316 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 FCGRTP55899 365 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 FAAP100Q0VG06 881 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 ITGA9Q13797 1035 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 TIGD5Q53EQ6 642 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 BSPRYQ5W0U4 402 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 LVRNQ6Q4G3 990 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 ADGRD1Q6QNK2 874 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 CAND1Q86VP6 1230 aaKnown RBP11.87□□□□□ -0.51
USP35-207ENST00000530546 SPATA24Q86W54 205 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 TP53INP2Q8IXH6 220 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 KBTBD2Q8IY47 623 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 RNF139Q8WU17 664 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 PPP2R3CQ969Q6 453 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 MCUR1Q96AQ8 359 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 CATSPER2Q96P56 530 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 TSPAN18Q96SJ8 248 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 SLCO1B3Q9NPD5 702 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 ARHGEF4Q9NR80 690 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 PIGVQ9NUD9 493 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 F8W8V4 182 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 IGHA2P01877 340 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 PIM1P11309 404 aaPredicted RBP11.86□□□□□ -0.51
USP35-207ENST00000530546 CCND3P30281 292 aaPredicted RBP11.86□□□□□ -0.51
USP35-207ENST00000530546 SCNN1AP37088 669 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 IFRD2Q12894 506 aaPredicted RBP11.86□□□□□ -0.51
USP35-207ENST00000530546 PTK7Q13308 1070 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 KCNA10Q16322 511 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 SERINC5Q86VE9 423 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 MPP5Q8N3R9 675 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 DENND1AQ8TEH3 1009 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 RTP4Q96DX8 246 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 IQCGQ9H095 443 aaKnown RBP11.86□□□□□ -0.51
USP35-207ENST00000530546 STAP1Q9ULZ2 295 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 SMG5Q9UPR3 1016 aaKnown RBP11.86□□□□□ -0.51
USP35-207ENST00000530546 NOD1Q9Y239 953 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 GPR182O15218 404 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 GYG2O15488 501 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 HNRNPRO43390 633 aaKnown RBP11.86□□□□□ -0.51
USP35-207ENST00000530546 MT-ND3P03897 115 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 NCAM1P13591 858 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 YY1P25490 414 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 CRABP2P29373 138 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 CACNB2Q08289 660 aaPredicted RBP11.86□□□□□ -0.51
USP35-207ENST00000530546 SREBF2Q12772 1141 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 ZMIZ2Q8NF64 920 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 TFB1MQ8WVM0 346 aaKnown RBP11.86□□□□□ -0.51
USP35-207ENST00000530546 PTCD3Q96EY7 689 aaKnown RBP11.86□□□□□ -0.51
USP35-207ENST00000530546 QKIQ96PU8 341 aaKnown RBP eCLIP11.86□□□□□ -0.51
USP35-207ENST00000530546 NPY6RQ99463 290 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 POPDC2Q9HBU9 364 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 PTTG2Q9NZH5 202 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 SENP1Q9P0U3 644 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 SNX10Q9Y5X0 201 aa11.86□□□□□ -0.51
USP35-207ENST00000530546 FAM155AB1AL88 458 aaPredicted RBP11.85□□□□□ -0.51
USP35-207ENST00000530546 ADRA1DP25100 572 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 LHX1P48742 406 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 ACAD11Q709F0 780 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 HTR3CQ8WXA8 447 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 DDX50Q9BQ39 737 aaKnown RBP11.85□□□□□ -0.51
USP35-207ENST00000530546 ECSITQ9BQ95 431 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 PHACTR1Q9C0D0 580 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 WDR37Q9Y2I8 494 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 CXorf49A8MYA2 514 aaPredicted RBP11.85□□□□□ -0.51
USP35-207ENST00000530546 FAM72CH0Y354 149 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 H3BRJ5 948 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 SEPT4O43236 478 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 TYROBPO43914 113 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 FYNP06241 537 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 CRADDP78560 199 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 FAM72AQ5TYM5 149 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 FAM72DQ6L9T8 149 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 CASC4Q6P4E1 433 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 ARCQ7LC44 396 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 MTDHQ86UE4 582 aaKnown RBP11.85□□□□□ -0.51
USP35-207ENST00000530546 FAM72BQ86X60 149 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 TCP10LQ8TDR4 215 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 ADAM2Q99965 735 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 PPCSQ9HAB8 311 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 ANLNQ9NQW6 1124 aa11.85□□□□□ -0.51
USP35-207ENST00000530546 TRMT13Q9NUP7 481 aaKnown RBP11.85□□□□□ -0.51
USP35-207ENST00000530546 DDIT4Q9NX09 232 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms