RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 SLC12A1Q13621 1099 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 C15orf59Q2T9L4 293 aaPredicted RBP17.89■□□□□ 0.45
USP35-202ENST00000528910 PLEKHG6Q3KR16 790 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 HGSNATQ68CP4 663 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 DNAJC24Q6P3W2 148 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 PHLDB2Q86SQ0 1253 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 C14orf80Q86SX3 495 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 FAM131BQ86XD5 332 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 KDM1BQ8NB78 822 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 MRGPRX1Q96LB2 322 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 C1orf74Q96LT6 269 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 HAPLN3Q96S86 360 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 CAPN11Q9UMQ6 739 aa17.89■□□□□ 0.45
USP35-202ENST00000528910 DDX3XO00571 662 aaKnown RBP eCLIP17.88■□□□□ 0.45
USP35-202ENST00000528910 CLDN11O75508 207 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 TPM3P06753 285 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 RRM1P23921 792 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 OXCT1P55809 520 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 HDAC4P56524 1084 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 ZBED6P86452 979 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 NRG1Q02297 640 aaPredicted RBP17.88■□□□□ 0.45
USP35-202ENST00000528910 BYSLQ13895 437 aaKnown RBP17.88■□□□□ 0.45
USP35-202ENST00000528910 ELF2Q15723 593 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 FNDC3BQ53EP0 1204 aaKnown RBP17.88■□□□□ 0.45
USP35-202ENST00000528910 RAB6CQ53S08 254 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 WDR59Q6PJI9 974 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 METTL3Q86U44 580 aaKnown RBP17.88■□□□□ 0.45
USP35-202ENST00000528910 GPR161Q8N6U8 529 aaKnown RBP17.88■□□□□ 0.45
USP35-202ENST00000528910 MRGPRX3Q96LB0 322 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 MKRN2Q9H000 416 aaKnown RBP17.88■□□□□ 0.45
USP35-202ENST00000528910 RAB6CQ9H0N0 254 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 TMPRSS4Q9NRS4 437 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 PLA2G4CQ9UP65 541 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 PCDHGA5Q9Y5G8 931 aa17.88■□□□□ 0.45
USP35-202ENST00000528910 DRGXA6NNA5 263 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 ZBTB24O43167 697 aaPredicted RBP17.87■□□□□ 0.45
USP35-202ENST00000528910 SYNCRIPO60506 623 aaKnown RBP17.87■□□□□ 0.45
USP35-202ENST00000528910 ZNF217O75362 1048 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 RHOBTB1O94844 696 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 MOCS3O95396 460 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 EPHX1P07099 455 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 HLA-EP13747 358 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 ZNF143P52747 638 aaPredicted RBP17.87■□□□□ 0.45
USP35-202ENST00000528910 COPAP53621 1224 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 CDH4P55283 916 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 ARID5BQ14865 1188 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 CDO1Q16878 200 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 SH3PXD2AQ5TCZ1 1133 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 PGBD3Q8N328 593 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 FAM172AQ8WUF8 416 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 RLN3Q8WXF3 142 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 NTAN1Q96AB6 310 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 ALG14Q96F25 216 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 MCEEQ96PE7 176 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 SIK2Q9H0K1 926 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 FBRSQ9HAH7 460 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 PARD6AQ9NPB6 346 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 USP36Q9P275 1121 aaKnown RBP17.87■□□□□ 0.45
USP35-202ENST00000528910 MBD1Q9UIS9 605 aaPredicted RBP17.87■□□□□ 0.45
USP35-202ENST00000528910 INVSQ9Y283 1065 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 TBC1D30Q9Y2I9 924 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 SNX10Q9Y5X0 201 aa17.87■□□□□ 0.45
USP35-202ENST00000528910 BZW2Q9Y6E2 419 aaKnown RBP17.87■□□□□ 0.45
USP35-202ENST00000528910 E9PAM4 449 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 CCP110O43303 1012 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 CBFA2T2O43439 604 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 SRPRAP08240 638 aaKnown RBP17.86■□□□□ 0.45
USP35-202ENST00000528910 SKILP12757 684 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 RPL7AP62424 266 aaKnown RBP17.86■□□□□ 0.45
USP35-202ENST00000528910 SCAPQ12770 1279 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 ALFQ53S48 1182 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 MANEALQ5VSG8 457 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 PLEKHA7Q6IQ23 1121 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 APCDD1Q8J025 514 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 OR52K2Q8NGK3 314 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 OR2T3Q8NH03 318 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 SLC6A17Q9H1V8 727 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 PPARGC1AQ9UBK2 798 aaKnown RBP17.86■□□□□ 0.45
USP35-202ENST00000528910 ZNF212Q9UDV6 495 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 ERVW-1Q9UQF0 538 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 OR51B4Q9Y5P0 310 aa17.86■□□□□ 0.45
USP35-202ENST00000528910 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.85■□□□□ 0.45
USP35-202ENST00000528910 IGHV1OR15-9A0A0B4J2B8 117 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 CNTN5O94779 1100 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 IGLV3-19P01714 112 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 MZF1P28698 734 aaPredicted RBP17.85■□□□□ 0.45
USP35-202ENST00000528910 ADRA1BP35368 520 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 CTSOP43234 321 aaPredicted RBP17.85■□□□□ 0.45
USP35-202ENST00000528910 VASPP50552 380 aaPredicted RBP17.85■□□□□ 0.45
USP35-202ENST00000528910 SPEM2Q0P670 501 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 ZNF177Q13360 481 aaPredicted RBP17.85■□□□□ 0.45
USP35-202ENST00000528910 MAMLD1Q13495 774 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 ARL13BQ3SXY8 428 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 TDRD12Q587J7 1177 aaKnown RBP17.85■□□□□ 0.45
USP35-202ENST00000528910 SPDYCQ5MJ68 293 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 PLA2G2CQ5R387 149 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 KIAA1324Q6UXG2 1013 aaKnown RBP17.85■□□□□ 0.45
USP35-202ENST00000528910 LRRC31Q6UY01 552 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 KIAA2013Q8IYS2 634 aa17.85■□□□□ 0.45
USP35-202ENST00000528910 FRMD1Q8N878 549 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms