RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 THEGLP0DJG4 465 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 P4HA1P13674 534 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 CD70P32970 193 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 FOXK1P85037 733 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 ADGRF1Q5T601 910 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 RBM44Q6ZP01 1051 aaKnown RBP18.16■□□□□ 0.5
PVT1-220ENST00000524165 RSRC2Q7L4I2 434 aaKnown RBP18.16■□□□□ 0.5
PVT1-220ENST00000524165 FAM26EQ8N5C1 309 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 FAM131CQ96AQ9 280 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 CYFIP2Q96F07 1278 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 FAM129BQ96TA1 746 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 DUSP23Q9BVJ7 150 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 CCDC39Q9UFE4 941 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 UBE4BO95155 1302 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 ABCA12Q86UK0 2595 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 NEMP2A6NFY4 417 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 TCEA3O75764 348 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 CLSTN1O94985 981 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 LATS1O95835 1130 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 PSMD8P48556 350 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 KCNMA1Q12791 1236 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 FOXR1Q6PIV2 292 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 TRIM69Q86WT6 500 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 TPCN2Q8NHX9 752 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 WFDC5Q8TCV5 224 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 EPSTI1Q96J88 318 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 MRGPRX3Q96LB0 322 aa18.15■□□□□ 0.5
PVT1-220ENST00000524165 IRX2Q9BZI1 471 aaPredicted RBP18.15■□□□□ 0.5
PVT1-220ENST00000524165 GEMIN8Q9NWZ8 242 aaKnown RBP18.15■□□□□ 0.5
PVT1-220ENST00000524165 EDDM13A0A1B0GTR0 161 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 PMS2P1A4D2B8 440 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 SCAMP1O15126 338 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 SLC7A4O43246 635 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 RNGTTO60942 597 aaKnown RBP18.14■□□□□ 0.49
PVT1-220ENST00000524165 HOXD13P35453 343 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 BIRC3Q13489 604 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 NCOA4Q13772 614 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 TBR1Q16650 682 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 SETMARQ53H47 684 aaPredicted RBP18.14■□□□□ 0.49
PVT1-220ENST00000524165 XXYLT1Q8NBI6 393 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 LMLNQ96KR4 655 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 NCKIPSDQ9NZQ3 722 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 ACSL6Q9UKU0 697 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 PCDHGA7Q9Y5G6 932 aa18.14■□□□□ 0.49
PVT1-220ENST00000524165 CCDC187A0A096LP49 1063 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 K7ESM1 405 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 NOBOXO60393 691 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 MAT2AP31153 395 aaKnown RBP18.13■□□□□ 0.49
PVT1-220ENST00000524165 DRD3P35462 400 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 AP3M2P53677 418 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 RRAGBQ5VZM2 374 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.13■□□□□ 0.49
PVT1-220ENST00000524165 IFT43Q96FT9 208 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 DUSP16Q9BY84 665 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 EPN3Q9H201 632 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 AGPAT3Q9NRZ7 376 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 WDR70Q9NW82 654 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 HBS1LQ9Y450 684 aaKnown RBP18.13■□□□□ 0.49
PVT1-220ENST00000524165 ITIH6Q6UXX5 1313 aa18.13■□□□□ 0.49
PVT1-220ENST00000524165 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.12■□□□□ 0.49
PVT1-220ENST00000524165 BLACEA4D250 179 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 TTC34A8MYJ7 566 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 PLRG1O43660 514 aaKnown RBP18.12■□□□□ 0.49
PVT1-220ENST00000524165 SRPRAP08240 638 aaKnown RBP18.12■□□□□ 0.49
PVT1-220ENST00000524165 CSKP41240 450 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 SGSHP51688 502 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 YWHAGP61981 247 aaKnown RBP eCLIP18.12■□□□□ 0.49
PVT1-220ENST00000524165 ZNF177Q13360 481 aaPredicted RBP18.12■□□□□ 0.49
PVT1-220ENST00000524165 ZCCHC8Q6NZY4 707 aaKnown RBP18.12■□□□□ 0.49
PVT1-220ENST00000524165 CCDC65Q8IXS2 484 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 TMEM145Q8NBT3 493 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 FIBINQ8TAL6 211 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 ZNF564Q8TBZ8 553 aaPredicted RBP18.12■□□□□ 0.49
PVT1-220ENST00000524165 ARRDC3Q96B67 414 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 ELMO3Q96BJ8 720 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 LRRC4CQ9HCJ2 640 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 OLA1Q9NTK5 396 aaKnown RBP18.12■□□□□ 0.49
PVT1-220ENST00000524165 CACNA1DQ01668 2161 aa18.12■□□□□ 0.49
PVT1-220ENST00000524165 EIF3DO15371 548 aaKnown RBP eCLIP18.11■□□□□ 0.49
PVT1-220ENST00000524165 TGFB1I1O43294 461 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 KIF20AO95235 890 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 IL1BP01584 269 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
PVT1-220ENST00000524165 MZF1P28698 734 aaPredicted RBP18.11■□□□□ 0.49
PVT1-220ENST00000524165 CYP2J2P51589 502 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 SNRPFP62306 86 aaKnown RBP18.11■□□□□ 0.49
PVT1-220ENST00000524165 ELAVL3Q14576 367 aaKnown RBP18.11■□□□□ 0.49
PVT1-220ENST00000524165 SGSM1Q2NKQ1 1148 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 KMT5BQ4FZB7 885 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 C14orf80Q86SX3 495 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 STK40Q8N2I9 435 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 ADNPQ9H2P0 1102 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 INTS6Q9UL03 887 aaKnown RBP18.11■□□□□ 0.49
PVT1-220ENST00000524165 ERVW-1Q9UQF0 538 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 CA5BQ9Y2D0 317 aa18.11■□□□□ 0.49
PVT1-220ENST00000524165 CENPEQ02224 2701 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 SCN8AQ9UQD0 1980 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 EME2A4GXA9 379 aaPredicted RBP18.1■□□□□ 0.49
PVT1-220ENST00000524165 TBL1XO60907 577 aa18.1■□□□□ 0.49
PVT1-220ENST00000524165 RTN2O75298 545 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms