RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ARNTL2Q8WYA1 636 aa26.53■■□□□ 1.84
COL13A1-214ENST00000522165 SCLYQ96I15 445 aa26.53■■□□□ 1.84
COL13A1-214ENST00000522165 OAS1P00973 400 aaKnown RBP26.53■■□□□ 1.84
COL13A1-214ENST00000522165 MGAT1P26572 445 aa26.53■■□□□ 1.84
COL13A1-214ENST00000522165 CD68P34810 354 aaPredicted RBP26.53■■□□□ 1.84
COL13A1-214ENST00000522165 CRADDP78560 199 aa26.53■■□□□ 1.84
COL13A1-214ENST00000522165 HHATQ5VTY9 493 aa26.53■■□□□ 1.84
COL13A1-214ENST00000522165 TBC1D31Q96DN5 1066 aa26.53■■□□□ 1.84
COL13A1-214ENST00000522165 MRPL9Q9BYD2 267 aaKnown RBP26.53■■□□□ 1.84
COL13A1-214ENST00000522165 GBA3Q9H227 469 aa26.53■■□□□ 1.84
COL13A1-214ENST00000522165 TMEM51Q9NW97 253 aa26.53■■□□□ 1.84
COL13A1-214ENST00000522165 PIH1D1Q9NWS0 290 aaKnown RBP26.53■■□□□ 1.84
COL13A1-214ENST00000522165 GMIPQ9P107 970 aa26.53■■□□□ 1.84
COL13A1-214ENST00000522165 FGF10O15520 208 aaPredicted RBP26.52■■□□□ 1.84
COL13A1-214ENST00000522165 ALDH1A2O94788 518 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 SUN1O94901 812 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 AP2A1O95782 977 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 GALTP07902 379 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 CSH1P0DML2 217 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 CSH2P0DML3 217 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 ARPP19P56211 112 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 COG7P83436 770 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 SLC18A2Q05940 514 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 ZNF33AQ06730 810 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 RNF187Q5TA31 235 aaPredicted RBP26.52■■□□□ 1.84
COL13A1-214ENST00000522165 CASC4Q6P4E1 433 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 LVRNQ6Q4G3 990 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 RGS9BPQ6ZS82 235 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 CCNJLQ8IV13 435 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 ZSCAN18Q8TBC5 510 aaPredicted RBP26.52■■□□□ 1.84
COL13A1-214ENST00000522165 OXNAD1Q96HP4 312 aaPredicted RBP26.52■■□□□ 1.84
COL13A1-214ENST00000522165 AGAP3Q96P47 875 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 TMEM175Q9BSA9 504 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 OGDHLQ9ULD0 1010 aa26.52■■□□□ 1.84
COL13A1-214ENST00000522165 FAM92AA1XBS5 289 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 TBKBP1A7MCY6 615 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 TM9SF1O15321 606 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 TBC1D4O60343 1298 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 SF3A3Q12874 501 aaKnown RBP eCLIP26.51■■□□□ 1.83
COL13A1-214ENST00000522165 ELAVL2Q12926 359 aaKnown RBP26.51■■□□□ 1.83
COL13A1-214ENST00000522165 ZKSCAN8Q15776 578 aaPredicted RBP26.51■■□□□ 1.83
COL13A1-214ENST00000522165 PDK4Q16654 411 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 ITPRIPL1Q6GPH6 555 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 RSPO2Q6UXX9 243 aaPredicted RBP26.51■■□□□ 1.83
COL13A1-214ENST00000522165 TCP10LQ8TDR4 215 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 CATSPERBQ9H7T0 1116 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 TLR6Q9Y2C9 796 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 SCN5AQ14524 2016 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 TRIM49D1C9J1S8 452 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 NT5C1B-RDH14C9J2C7 533 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 UGT1A9O60656 530 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 KRT37O76014 449 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 SNRPAP09012 282 aaKnown RBP26.51■■□□□ 1.83
COL13A1-214ENST00000522165 CPB1P15086 417 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 PGAM1P18669 254 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 NRG1Q02297 640 aaPredicted RBP26.51■■□□□ 1.83
COL13A1-214ENST00000522165 GPR17Q13304 367 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 RTP2Q5QGT7 225 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 LGSNQ5TDP6 509 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 ARHGAP12Q8IWW6 846 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 GPR152Q8TDT2 470 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 SLC39A13Q96H72 371 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 TEKT5Q96M29 485 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 NAT9Q9BTE0 207 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 UGT1A7Q9HAW7 530 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 UGT1A10Q9HAW8 530 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 UGT1A8Q9HAW9 530 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 HS3ST4Q9Y661 456 aa26.51■■□□□ 1.83
COL13A1-214ENST00000522165 SHROOM3Q8TF72 1996 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 MTMR11A4FU01 709 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 CXCL10P02778 98 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 PBX3P40426 434 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 KCTD11Q693B1 232 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 CCDC121Q6ZUS5 278 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 LZTR1Q8N653 840 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 TSGA13Q96PP4 275 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 SYBUQ9NX95 663 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 ERI2A8K979 691 aaKnown RBP26.5■■□□□ 1.83
COL13A1-214ENST00000522165 SOAT2O75908 522 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 VNN2O95498 520 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 MOCS2O96007 188 aaPredicted RBP26.5■■□□□ 1.83
COL13A1-214ENST00000522165 JCHAINP01591 159 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 YWHAQP27348 245 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 TMEM173Q86WV6 379 aaPredicted RBP26.5■■□□□ 1.83
COL13A1-214ENST00000522165 HIPK3Q9H422 1215 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 SLC27A5Q9Y2P5 690 aa26.5■■□□□ 1.83
COL13A1-214ENST00000522165 USP15Q9Y4E8 981 aaPredicted RBP26.5■■□□□ 1.83
COL13A1-214ENST00000522165 DFFAO00273 331 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 PYGBP11216 843 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 NFKB1P19838 968 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 CCNCP24863 283 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 CCL23P55773 120 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 OLIG2Q13516 323 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 OR52K1Q8NGK4 314 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 SPPL2BQ8TCT7 592 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 TTC17Q96AE7 1141 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 APOPT1Q96IL0 206 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 C1orf74Q96LT6 269 aa26.49■■□□□ 1.83
COL13A1-214ENST00000522165 MLPHQ9BV36 600 aaPredicted RBP26.49■■□□□ 1.83
COL13A1-214ENST00000522165 CRISPLD1Q9H336 500 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms