RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 USP49Q70CQ1 688 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 MCM10Q7L590 875 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 ZNF804AQ7Z570 1209 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 DEFB128Q7Z7B8 93 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 HERC6Q8IVU3 1022 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 ZFPM1Q8IX07 1006 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 CFAP52Q8N1V2 620 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 AFG1LQ8WV93 481 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 ASB12Q8WXK4 309 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 MBD6Q96DN6 1003 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLC46A1Q96NT5 459 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 TRAPPC9Q96Q05 1148 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 TGS1Q96RS0 853 aaKnown RBP5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 TRIB1Q96RU8 372 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 TESK2Q96S53 571 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 TTPALQ9BTX7 342 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 LSM14BQ9BX40 385 aaKnown RBP5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLC46A2Q9BY10 475 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 TWSG1Q9GZX9 223 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 SERHL2Q9H4I8 314 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 MIS18AQ9NYP9 233 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 DNAJB11Q9UBS4 358 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 FEM1BQ9UK73 627 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLC45A2Q9UMX9 530 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 HPSEQ9Y251 543 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 DOCK1Q14185 1865 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 SALL1Q9NSC2 1324 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 NOTCH2Q04721 2471 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 ANKRD18BA2A2Z9 1011 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 CDC14BO60729 498 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 USP1O94782 785 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 ITGB1P05556 798 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 POLBP06746 335 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 ANXA6P08133 673 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 IFIT1P09914 478 aaKnown RBP5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 CKMT1AP12532 417 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 TAL1P17542 331 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 EIF2S2P20042 333 aaKnown RBP5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 CNTFP26441 200 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 PPIFP30405 207 aaKnown RBP5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 ACLYP53396 1101 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 PRKAG1P54619 331 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 TCP10Q12799 353 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 CSHL1Q14406 222 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 PROSER3Q2NL68 480 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 PRAMEF19Q5SWL8 479 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 CERCAMQ5T4B2 595 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 RAP1GAP2Q684P5 730 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 RINT1Q6NUQ1 792 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 FAM180BQ6P0A1 224 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 CFAP161Q6P656 301 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 FOXR2Q6PJQ5 311 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 ARHGEF18Q6ZSZ5 1173 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 MED25Q71SY5 747 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 SIMC1Q8NDZ2 872 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 MRPL38Q96DV4 380 aaKnown RBP5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 NEIL1Q96FI4 390 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 GLT1D1Q96MS3 346 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 TIGD1Q96MW7 591 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 PTDSS2Q9BVG9 487 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 TRIM5Q9C035 493 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 RNPEPQ9H4A4 650 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 TXNRD2Q9NNW7 524 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 DNMT3BQ9UBC3 853 aaKnown RBP5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 CD207Q9UJ71 328 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 ZNF112Q9UJU3 913 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 AGAP1Q9UPQ3 857 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 KCTD3Q9Y597 815 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 UMODL1Q5DID0 1318 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 KIF16BQ96L93 1317 aa5.2□□□□□ -1.58
HMGB1P23-201ENST00000518743 LOC285556D6RIA3 1793 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 ADAMTS20P59510 1910 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 ASXL3Q9C0F0 2248 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 COL11A1P12107 1806 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLC15A5A6NIM6 579 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 SAC3D1A6NKF1 404 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 DRGXA6NNA5 263 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 E9PLN8 166 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 ETV2O00321 342 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 B4GALT4O60513 344 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 LARGE1O95461 756 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 SPATA31D3P0C874 917 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 PECAM1P16284 738 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 PI3P19957 117 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 CAPN3P20807 821 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 DGKEP52429 567 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 PTTG1IPP53801 180 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 FKBP1AP62942 108 aaKnown RBP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 CCNA1P78396 465 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 SHC2P98077 582 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 CHRNDQ07001 517 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 SLC12A1Q13621 1099 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 E2F2Q14209 437 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 RPS6KA2Q15349 733 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 TBRG1Q3YBR2 411 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 SPATA1Q5VX52 437 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 ANKS6Q68DC2 871 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms