RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PTPRHQ9HD43 1115 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 NRBP2Q9NSY0 501 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 FAIMQ9NVQ4 179 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 TXNDC16Q9P2K2 825 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 SIX4Q9UIU6 781 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 RIPK3Q9Y572 518 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 PSAT1Q9Y617 370 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 GAS2O43903 313 aaKnown RBP18.15■□□□□ 0.5
NUP54-205ENST00000507257 H6PDO95479 791 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 PRKCBP05771 671 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 C8BP07358 591 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 TPP2P29144 1249 aaPredicted RBP18.15■□□□□ 0.5
NUP54-205ENST00000507257 GK3PQ14409 553 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 IRAK1BP1Q5VVH5 260 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 IER5Q5VY09 327 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 OR6B2Q6IFH4 312 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 POTEHQ6S545 545 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 KCNT2Q6UVM3 1135 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 CARM1Q86X55 608 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 REPS2Q8NFH8 660 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 BHLHE22Q8NFJ8 381 aaPredicted RBP18.15■□□□□ 0.5
NUP54-205ENST00000507257 RDH11Q8TC12 318 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 DUS3LQ96G46 650 aaKnown RBP18.15■□□□□ 0.5
NUP54-205ENST00000507257 RBBP8Q99708 897 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 C2orf40Q9H1Z8 148 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 MAN1C1Q9NR34 630 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 VTI1BQ9UEU0 232 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 PTPRFP10586 1907 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 RLFQ13129 1914 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 SH3PXD2BA1X283 911 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 DGKIO75912 1065 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 YBX3P16989 372 aaKnown RBP eCLIP18.15■□□□□ 0.59e-8■■■■□ 24.8
NUP54-205ENST00000507257 SDC4P31431 198 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 SPRP35270 261 aaPredicted RBP18.15■□□□□ 0.5
NUP54-205ENST00000507257 GALK1P51570 392 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 LIMK2P53671 638 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 CDH8P55286 799 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 NUP107P57740 925 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 MS4A2Q01362 244 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 INCA1Q0VD86 236 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 SLC10A2Q12908 348 aaPredicted RBP18.15■□□□□ 0.5
NUP54-205ENST00000507257 CA9Q16790 459 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 CDO1Q16878 200 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 PPM1JQ5JR12 505 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 NAPRTQ6XQN6 538 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 AMIGO2Q86SJ2 522 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 ZBTB8OSQ8IWT0 167 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 CEP70Q8NHQ1 597 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 ZNF526Q8TF50 670 aaPredicted RBP18.15■□□□□ 0.5
NUP54-205ENST00000507257 EFCAB1Q9HAE3 211 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 PLGRKTQ9HBL7 147 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 MRGBPQ9NV56 204 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 GPATCH2LQ9NWQ4 482 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 UTP6Q9NYH9 597 aaKnown RBP18.15■□□□□ 0.5
NUP54-205ENST00000507257 HMGXB4Q9UGU5 601 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 USP21Q9UK80 565 aa18.15■□□□□ 0.5
NUP54-205ENST00000507257 COL11A1P12107 1806 aaPredicted RBP18.14■□□□□ 0.5
NUP54-205ENST00000507257 GOLGA8QA0A0J9YX86 632 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 GOLGA8OA6NCC3 632 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 TRIM64CA6NLI5 447 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 FAM155AB1AL88 458 aaPredicted RBP18.14■□□□□ 0.49
NUP54-205ENST00000507257 GOLGA8NF8WBI6 632 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 H3BNH8 94 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 SERPINB5P36952 375 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 ACADVLP49748 655 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 GBE1Q04446 702 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 MGAT5BQ3V5L5 792 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 DUS1LQ6P1R4 473 aaKnown RBP18.14■□□□□ 0.49
NUP54-205ENST00000507257 CASC4Q6P4E1 433 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 KLHL35Q6PF15 583 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 OLFML1Q6UWY5 402 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 Q6ZNX1 250 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 PRPF31Q8WWY3 499 aaKnown RBP18.14■□□□□ 0.49
NUP54-205ENST00000507257 HTR3CQ8WXA8 447 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 CERS2Q96G23 380 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 CCT7Q99832 543 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 DRC3Q9H069 523 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 RPAP3Q9H6T3 665 aaPredicted RBP18.14■□□□□ 0.49
NUP54-205ENST00000507257 WDR41Q9HAD4 459 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 NGRNQ9NPE2 291 aaKnown RBP18.14■□□□□ 0.49
NUP54-205ENST00000507257 VPS45Q9NRW7 570 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 SLC17A6Q9P2U8 582 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 EPS15L1Q9UBC2 864 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 RNF11Q9Y3C5 154 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 PCDHGA4Q9Y5G9 962 aa18.14■□□□□ 0.49
NUP54-205ENST00000507257 ONECUT3O60422 494 aaPredicted RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 BMP10O95393 424 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 POLBP06746 335 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 HSPA1AP0DMV8 641 aaKnown RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 HSPA1BP0DMV9 641 aaKnown RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 SP2Q02086 613 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 MXD4Q14582 209 aaPredicted RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 PPP2R5DQ14738 602 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 SEL1L3Q68CR1 1132 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 SCYL2Q6P3W7 929 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 DCLK2Q8N568 766 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 C1orf127Q8N9H9 656 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 JDP2Q8WYK2 163 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 RSPH1Q8WYR4 309 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 UHRF1Q96T88 793 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms