RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 TTC30AQ86WT1 665 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 TMEM130Q8N3G9 435 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 PYDC1Q8WXC3 89 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 ART4Q93070 314 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 DEFB118Q96PH6 123 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 LHX5Q9H2C1 402 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 PCDH18Q9HCL0 1135 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 LATS2Q9NRM7 1088 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 TRMT13Q9NUP7 481 aaKnown RBP11.56□□□□□ -0.56
SMPD4-218ENST00000482171 TMEM39AQ9NV64 488 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 NMRK1Q9NWW6 199 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 SLC24A2Q9UI40 661 aa11.56□□□□□ -0.56
SMPD4-218ENST00000482171 RPLP2P05387 115 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 OR1E1P30953 314 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 ASPAP45381 313 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 NUDT2P50583 147 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 NRLP54845 237 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 OCA2Q04671 838 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 MPP3Q13368 585 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 SLC45A4Q5BKX6 768 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 NOMO2Q5JPE7 1267 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 LINC00523Q86TU6 105 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 OR52K1Q8NGK4 314 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 CLEC4CQ8WTT0 213 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 BORCS6Q96GS4 357 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 CCDC90BQ9GZT6 254 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 CCDC134Q9H6E4 229 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 LMCD1Q9NZU5 365 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 TAGLN3Q9UI15 199 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 STARD13Q9Y3M8 1113 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 H7C4K7 107 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 BUD23O43709 281 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 SNAI1O95863 264 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 TMED10P49755 219 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 MARC1Q5VT66 337 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 ZCCHC23Q6ZST2 131 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 POLNQ7Z5Q5 900 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 DDI1Q8WTU0 396 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 DUSP16Q9BY84 665 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 KLHL4Q9C0H6 718 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 CDHR5Q9HBB8 845 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 TBC1D23Q9NUY8 699 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 NDUFA13Q9P0J0 144 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 KAT6AQ92794 2004 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 MYBPHLA2RUH7 354 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 PGM3O95394 542 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 CHRM3P20309 590 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 MATKP42679 507 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 MRPS5P82675 430 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 TMTC4Q5T4D3 741 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 DCAF12L1Q5VU92 463 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 ATAD1Q8NBU5 361 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 GFM2Q969S9 779 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 OXNAD1Q96HP4 312 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 SAR1AQ9NR31 198 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 TLR8Q9NR97 1041 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 AAR2Q9Y312 384 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 TMEM88BA6NKF7 163 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 STX7O15400 261 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 MSI1O43347 362 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 HOXA2O43364 376 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 VAPBO95292 243 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 ERVK-10P10266 1014 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 FASTKD3Q14CZ7 662 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 EFTUD2Q15029 972 aaKnown RBP eCLIP11.55□□□□□ -0.563e-6■■■■□ 21.2
SMPD4-218ENST00000482171 CCDC92Q53HC0 331 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 TCHHL1Q5QJ38 904 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 C16orf46Q6P387 395 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 DDX53Q86TM3 631 aaKnown RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 PYROXD2Q8N2H3 581 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 TLCD1Q96CP7 247 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 FBXO44Q9H4M3 255 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 FBXO6Q9NRD1 293 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-218ENST00000482171 MARCH2Q9P0N8 246 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 VPS28Q9UK41 221 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 CDH9Q9ULB4 789 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 NR2E3Q9Y5X4 410 aa11.55□□□□□ -0.56
SMPD4-218ENST00000482171 AP3B1O00203 1094 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 RAMP2O60895 175 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 FKBP6O75344 327 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 MT-CO1P00395 513 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 LMO3Q8TAP4 145 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 DRG1Q9Y295 367 aaKnown RBP11.54□□□□□ -0.56
SMPD4-218ENST00000482171 GON4LQ3T8J9 2241 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 AKAP10O43572 662 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 KCNA4P22459 653 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 CDKN2BP42772 138 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 NR2C2P49116 596 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 WNT7BP56706 349 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 MGAT5Q09328 741 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 RAP1GAP2Q684P5 730 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMPD4-218ENST00000482171 DEFB107AQ8IZN7 70 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 MRPS31Q92665 395 aaKnown RBP11.54□□□□□ -0.56
SMPD4-218ENST00000482171 NAT9Q9BTE0 207 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 R3HDMLQ9H3Y0 253 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 IL1RAPL1Q9NZN1 696 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 ZNF212Q9UDV6 495 aa11.54□□□□□ -0.56
SMPD4-218ENST00000482171 SUN2Q9UH99 717 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms