RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TMPRSS4Q9NRS4 437 aa24.77■■□□□ 1.56
CPNE1-223ENST00000475146 CKAP5Q14008 2032 aa24.77■■□□□ 1.56
CPNE1-223ENST00000475146 PLXND1Q9Y4D7 1925 aa24.76■■□□□ 1.55
CPNE1-223ENST00000475146 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-223ENST00000475146 BCLAF3A2AJT9 711 aaKnown RBP24.76■■□□□ 1.55
CPNE1-223ENST00000475146 I6L893 689 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-223ENST00000475146 AP5Z1O43299 807 aa24.76■■□□□ 1.55
CPNE1-223ENST00000475146 ID4P47928 161 aa24.76■■□□□ 1.55
CPNE1-223ENST00000475146 NUMBP49757 651 aa24.76■■□□□ 1.55
CPNE1-223ENST00000475146 COPAP53621 1224 aa24.76■■□□□ 1.55
CPNE1-223ENST00000475146 OXCT1P55809 520 aa24.76■■□□□ 1.55
CPNE1-223ENST00000475146 GSCP56915 257 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-223ENST00000475146 C1QBPQ07021 282 aaKnown RBP24.76■■□□□ 1.55
CPNE1-223ENST00000475146 ZNF177Q13360 481 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-223ENST00000475146 CAMK2GQ13555 558 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-223ENST00000475146 SF3A2Q15428 464 aaKnown RBP24.76■■□□□ 1.55
CPNE1-223ENST00000475146 C15orf59Q2T9L4 293 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-223ENST00000475146 RNF219Q5W0B1 726 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-223ENST00000475146 C3orf20Q8ND61 904 aa24.76■■□□□ 1.55
CPNE1-223ENST00000475146 RMDN1Q96DB5 314 aa24.76■■□□□ 1.55
CPNE1-223ENST00000475146 TTYH3Q9C0H2 523 aa24.76■■□□□ 1.55
CPNE1-223ENST00000475146 VPS45Q9NRW7 570 aa24.76■■□□□ 1.55
CPNE1-223ENST00000475146 C2CD4BA6NLJ0 364 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 PRR5-ARHGAP8B1AHC4 643 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 FOXD2O60548 495 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-223ENST00000475146 ZNF806P0C7X5 589 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 ACADMP11310 421 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 MZF1P28698 734 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-223ENST00000475146 CTSOP43234 321 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-223ENST00000475146 ARHGAP8P85298 464 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 SLC12A1Q13621 1099 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 CCDC14Q49A88 953 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 AASDHQ4L235 1098 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-223ENST00000475146 PLA2G2CQ5R387 149 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 ACAD10Q6JQN1 1059 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 CXorf57Q6NSI4 855 aaKnown RBP24.75■■□□□ 1.55
CPNE1-223ENST00000475146 DNAJC24Q6P3W2 148 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 LRRC31Q6UY01 552 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 BNIPLQ7Z465 357 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 DEFB119Q8N690 84 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 EDEM3Q9BZQ6 932 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 SUN2Q9UH99 717 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 ERVW-1Q9UQF0 538 aa24.75■■□□□ 1.55
CPNE1-223ENST00000475146 TMCO5BA8MYB1 307 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 NDUFS2O75306 463 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 CLDN11O75508 207 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 GPD1P21695 349 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 PTGER3P43115 390 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 CDH4P55283 916 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 ECT2LQ008S8 904 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 RSPO4Q2I0M5 234 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-223ENST00000475146 LYSMD4Q5XG99 296 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 E4F1Q66K89 784 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-223ENST00000475146 METTL3Q86U44 580 aaKnown RBP24.74■■□□□ 1.55
CPNE1-223ENST00000475146 PIGKQ92643 395 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 MRGPRX3Q96LB0 322 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 HAPLN3Q96S86 360 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 SYT11Q9BT88 431 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 NUP58Q9BVL2 599 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 MTG2Q9H4K7 406 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 HAUS4Q9H6D7 363 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 FBRSQ9HAH7 460 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 PRSS16Q9NQE7 514 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 TAS2R14Q9NYV8 317 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 AIPL1Q9NZN9 384 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 CDV3Q9UKY7 258 aaKnown RBP24.74■■□□□ 1.55
CPNE1-223ENST00000475146 CFAP54Q96N23 3096 aa24.74■■□□□ 1.55
CPNE1-223ENST00000475146 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-223ENST00000475146 ANKRD62A6NC57 917 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 CNTN5O94779 1100 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 ENDOD1O94919 500 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 SRPRAP08240 638 aaKnown RBP24.73■■□□□ 1.55
CPNE1-223ENST00000475146 CD6P30203 668 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 RFC1P35251 1148 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-223ENST00000475146 PTPN9P43378 593 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 KLHL30Q0D2K2 578 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 ARL13BQ3SXY8 428 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 C5orf22Q49AR2 442 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 RAB6CQ53S08 254 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 FIGNQ5HY92 759 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 SPDYCQ5MJ68 293 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 ACBD5Q5T8D3 534 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-223ENST00000475146 SH3PXD2AQ5TCZ1 1133 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 TCEAL6Q6IPX3 200 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 PPP1R2P3Q6NXS1 205 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 MCOLN2Q8IZK6 566 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 TCEAL3Q969E4 200 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 MYO19Q96H55 970 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 RPL10LQ96L21 214 aaKnown RBP24.73■■□□□ 1.55
CPNE1-223ENST00000475146 C1orf74Q96LT6 269 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 PPP1R9BQ96SB3 815 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 RAB6CQ9H0N0 254 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 IFNKQ9P0W0 207 aa24.73■■□□□ 1.55
CPNE1-223ENST00000475146 USP36Q9P275 1121 aaKnown RBP24.73■■□□□ 1.55
CPNE1-223ENST00000475146 ZNF292O60281 2723 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 SIGLEC16A6NMB1 481 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 E9PAM4 449 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 SRGAP2O75044 1071 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 SULT2A1Q06520 285 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 ALFQ53S48 1182 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms