RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 PLD5Q8N7P1 536 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 TDRD5Q8NAT2 981 aaKnown RBP14.08□□□□□ -0.16
NPHP4-207ENST00000470763 VPS50Q96JG6 964 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 PGLYRP2Q96PD5 576 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 TRPV6Q9H1D0 765 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 CYP26B1Q9NR63 512 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 K7EPI3 171 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 GRAP2O75791 330 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 FUCA1P04066 466 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 ZNF24P17028 368 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 POLR2BP30876 1174 aaKnown RBP14.07□□□□□ -0.16
NPHP4-207ENST00000470763 RAP1GAPP47736 663 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 HSD17B4P51659 736 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 PDCD4Q53EL6 469 aaKnown RBP14.07□□□□□ -0.16
NPHP4-207ENST00000470763 FAM47BQ8NA70 645 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 TMEM143Q96AN5 459 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 THAP11Q96EK4 314 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 PPP1R10Q96QC0 940 aaKnown RBP14.07□□□□□ -0.16
NPHP4-207ENST00000470763 TAAR1Q96RJ0 339 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 NPAS2Q99743 824 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 ZNF518BQ9C0D4 1074 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 IGSF9Q9P2J2 1179 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 FBXO40Q9UH90 709 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 SNX13Q9Y5W8 968 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 CDY2AQ9Y6F7 541 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 CDY1Q9Y6F8 540 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 ASS1P00966 412 aaKnown RBP14.07□□□□□ -0.16
NPHP4-207ENST00000470763 CHRNGP07510 517 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 TNFSF9P41273 254 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 ART3Q13508 389 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 IKBKEQ14164 716 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 CCDC92Q53HC0 331 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-207ENST00000470763 MTX3Q5HYI7 312 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 NXNQ6DKJ4 435 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 SCYL2Q6P3W7 929 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 CARM1Q86X55 608 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 PLD6Q8N2A8 252 aaKnown RBP14.07□□□□□ -0.16
NPHP4-207ENST00000470763 FIBCD1Q8N539 461 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 PCDHAC1Q9H158 963 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 C20orf96Q9NUD7 363 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-207ENST00000470763 TRNAU1APQ9NX07 287 aaKnown RBP14.07□□□□□ -0.16
NPHP4-207ENST00000470763 DCDC2Q9UHG0 476 aa14.07□□□□□ -0.16
NPHP4-207ENST00000470763 HTR3EA5X5Y0 456 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 LRRIQ4A6NIV6 560 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 BCAS2O75934 225 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-207ENST00000470763 ATE1O95260 518 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 ZBTB11O95625 1053 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-207ENST00000470763 EDN1P05305 212 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 GLDCP23378 1020 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 MPSTP25325 297 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 ABCG1P45844 678 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 BCAR1P56945 870 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 TXNL4AP83876 142 aaKnown RBP14.06□□□□□ -0.16
NPHP4-207ENST00000470763 CD300CQ08708 224 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 LSM12Q3MHD2 195 aaKnown RBP14.06□□□□□ -0.16
NPHP4-207ENST00000470763 CES3Q6UWW8 571 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 DCDC5Q6ZRR9 648 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 GPR180Q86V85 440 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 XYLT1Q86Y38 959 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 IDI2Q9BXS1 227 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 MOCS1Q9NZB8 636 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 ADA2Q9NZK5 511 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 PCDHB12Q9Y5F1 795 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 IDO1P14902 403 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 JAK3P52333 1124 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 TFDP2Q14188 446 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 MTERF2Q49AM1 385 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 DPH6Q7L8W6 267 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 HACE1Q8IYU2 909 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 LRRC39Q96DD0 335 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 FRMD8Q9BZ67 464 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-207ENST00000470763 GLIS2Q9BZE0 524 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-207ENST00000470763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.06□□□□□ -0.16
NPHP4-207ENST00000470763 PNPLA3Q9NST1 481 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 NXF1Q9UBU9 619 aaKnown RBP14.06□□□□□ -0.16
NPHP4-207ENST00000470763 BCAP29Q9UHQ4 241 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 J3QRK9 145 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 E2F6O75461 281 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 CD247P20963 164 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 CLCN2P51788 898 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 SESN2P58004 480 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-207ENST00000470763 HTRA3P83110 453 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 FAM102AQ5T9C2 384 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-207ENST00000470763 SWSAP1Q6NVH7 229 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 FBXL8Q96CD0 374 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 ZNF597Q96LX8 424 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 RNF157Q96PX1 679 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 MAF1Q9H063 256 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 SQORQ9Y6N5 450 aa14.06□□□□□ -0.16
NPHP4-207ENST00000470763 A0A1W2PPW3 197 aa14.05□□□□□ -0.16
NPHP4-207ENST00000470763 ACOT8O14734 319 aa14.05□□□□□ -0.16
NPHP4-207ENST00000470763 GIPC1O14908 333 aa14.05□□□□□ -0.16
NPHP4-207ENST00000470763 SEC24DO94855 1032 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-207ENST00000470763 VAPBO95292 243 aa14.05□□□□□ -0.16
NPHP4-207ENST00000470763 CKMT2P17540 419 aa14.05□□□□□ -0.16
NPHP4-207ENST00000470763 MX2P20592 715 aa14.05□□□□□ -0.16
NPHP4-207ENST00000470763 HMOX2P30519 316 aa14.05□□□□□ -0.16
NPHP4-207ENST00000470763 CDH5P33151 784 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-207ENST00000470763 MAGEA3P43357 314 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 713 ms