RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PHEXP78562 749 aa14.08□□□□□ -0.15
BRAT1-203ENST00000467558 ITGA9Q13797 1035 aa14.08□□□□□ -0.15
BRAT1-203ENST00000467558 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.08□□□□□ -0.15
BRAT1-203ENST00000467558 KYAT3Q6YP21 454 aaKnown RBP14.08□□□□□ -0.15
BRAT1-203ENST00000467558 OR52K1Q8NGK4 314 aa14.08□□□□□ -0.15
BRAT1-203ENST00000467558 TMEM120AQ9BXJ8 343 aa14.08□□□□□ -0.15
BRAT1-203ENST00000467558 ZYG11BQ9C0D3 744 aa14.08□□□□□ -0.15
BRAT1-203ENST00000467558 MRPL17Q9NRX2 175 aaKnown RBP14.08□□□□□ -0.15
BRAT1-203ENST00000467558 THAP1Q9NVV9 213 aa14.08□□□□□ -0.15
BRAT1-203ENST00000467558 RCOR3Q9P2K3 495 aaPredicted RBP14.08□□□□□ -0.15
BRAT1-203ENST00000467558 RAD54BQ9Y620 910 aa14.08□□□□□ -0.15
BRAT1-203ENST00000467558 CCNB1P14635 433 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 CHKAP35790 457 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 CSE1LP55060 971 aaKnown RBP14.08□□□□□ -0.16
BRAT1-203ENST00000467558 LILRA4P59901 499 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 ZNF284Q2VY69 593 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 TFAP2BQ92481 460 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 NKD2Q969F2 451 aaPredicted RBP14.08□□□□□ -0.16
BRAT1-203ENST00000467558 FAM136AQ96C01 138 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 CYLDQ9NQC7 956 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 CTNNAL1Q9UBT7 734 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 PLA2G4CQ9UP65 541 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 PRPF4O43172 522 aaKnown RBP eCLIP14.08□□□□□ -0.163e-6■■■■□ 20.4
BRAT1-203ENST00000467558 CA12O43570 354 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 UBOX5O94941 541 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 CALB2P22676 271 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 NOMO1Q15155 1222 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 PCID2Q5JVF3 399 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 ZNF333Q96JL9 665 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 LGMNQ99538 433 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 ACSS3Q9H6R3 686 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 NMRK2Q9NPI5 230 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 ADGRA3Q8IWK6 1321 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 PDHA1P08559 390 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 CKBP12277 381 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 ADRA1DP25100 572 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 SERPINH1P50454 418 aaKnown RBP14.08□□□□□ -0.16
BRAT1-203ENST00000467558 RASA2Q15283 850 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 ACBD5Q5T8D3 534 aaPredicted RBP14.08□□□□□ -0.16
BRAT1-203ENST00000467558 RAP1GAP2Q684P5 730 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 NEPROQ6NW34 567 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 SPPL2BQ8TCT7 592 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 ZNF75CPQ92670 426 aaPredicted RBP14.08□□□□□ -0.16
BRAT1-203ENST00000467558 EFCAB1Q9HAE3 211 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 STXBP5LQ9Y2K9 1186 aa14.08□□□□□ -0.16
BRAT1-203ENST00000467558 VGLL3A8MV65 326 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 ATXN8OSP0DMR3 200 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 UNGP13051 313 aaPredicted RBP14.07□□□□□ -0.16
BRAT1-203ENST00000467558 ALADP13716 330 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 GRK4P32298 578 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 PMF1Q6P1K2 205 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 VSTM1Q6UX27 236 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 EBNA1BP2Q99848 306 aaKnown RBP14.07□□□□□ -0.16
BRAT1-203ENST00000467558 TRIM4Q9C037 500 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 MORF4L1Q9UBU8 362 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 R3HDM2Q9Y2K5 976 aaKnown RBP14.07□□□□□ -0.16
BRAT1-203ENST00000467558 SRRM3A6NNA2 597 aaPredicted RBP14.07□□□□□ -0.16
BRAT1-203ENST00000467558 NQO1P15559 274 aaKnown RBP14.07□□□□□ -0.16
BRAT1-203ENST00000467558 NFKB1P19838 968 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 SMARCB1Q12824 385 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 PRKAA1Q13131 559 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 C4BP0C0L5 1744 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 LZTS3O60299 673 aaPredicted RBP14.07□□□□□ -0.16
BRAT1-203ENST00000467558 DGKIO75912 1065 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 VNN1O95497 513 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 CDKN2BP42772 138 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 NUDT2P50583 147 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 SGO1Q5FBB7 561 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 RNF217Q8TC41 542 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 LENG1Q96BZ8 264 aaPredicted RBP14.07□□□□□ -0.16
BRAT1-203ENST00000467558 RGS18Q9NS28 235 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 TAS2R13Q9NYV9 303 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 ANKRD6Q9Y2G4 727 aa14.07□□□□□ -0.16
BRAT1-203ENST00000467558 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 XYLBO75191 536 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 TRIM16O95361 564 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 AASDHQ4L235 1098 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 CYB5D1Q6P9G0 228 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 LRRC15Q8TF66 581 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 ZNF516Q92618 1163 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 CERS2Q96G23 380 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 C2orf49Q9BVC5 232 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 RUBCNLQ9H714 662 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 COL2A1P02458 1487 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 PTPN9P43378 593 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 CCDC149Q6ZUS6 474 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 ADCK2Q7Z695 626 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 CKAP2Q8WWK9 683 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 AJAP1Q9UKB5 411 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 ARHGAP10A1A4S6 786 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 ERVK-10P10266 1014 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 SELPP16109 830 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 HOXD13P35453 343 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 DDR2Q16832 855 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 PPM1LQ5SGD2 360 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 PGBD3Q8N328 593 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 TEX9Q8N6V9 391 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 ZNF557Q8N988 423 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 VPS37AQ8NEZ2 397 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 CSPG4P5Q96PW8 444 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms