RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TNNT1P13805 278 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 HOXB9P17482 250 aaPredicted RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 RXRAP19793 462 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 TGM2P21980 687 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 HOXA7P31268 230 aaPredicted RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 VPS41P49754 854 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 NR1H2P55055 460 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 SHC2P98077 582 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 HSF1Q00613 529 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 B4GALNT1Q00973 533 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 CFHR1Q03591 330 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 TBX2Q13207 712 aaPredicted RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 PDCLQ13371 301 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 TAF12Q16514 161 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 GPR162Q16538 588 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 BAK1Q16611 211 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 PFKFB3Q16875 520 aaPredicted RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 PRICKLE4Q2TBC4 344 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 GLE1Q53GS7 698 aaKnown RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 EARS2Q5JPH6 523 aaKnown RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 ANKRD45Q5TZF3 282 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 STRIP1Q5VSL9 837 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 SUMO4Q6EEV6 95 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 CCDC70Q6NSX1 233 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 MTFR2Q6P444 385 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 SERPINA13PQ6UXR4 307 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 ZNF66Q6ZN08 573 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 RBM44Q6ZP01 1051 aaKnown RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 ARHGEF25Q86VW2 580 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 ADGRG3Q86Y34 549 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 RHPN2Q8IUC4 686 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 TSPYL6Q8N831 410 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 LSM14AQ8ND56 463 aaKnown RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 LINS1Q8NG48 757 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 FAM110DQ8TAY7 271 aaPredicted RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 NTN5Q8WTR8 489 aaPredicted RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 ZFPM2Q8WW38 1151 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 HTRA1Q92743 480 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 MAP4K1Q92918 833 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 HS6ST2Q96MM7 605 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 CLSTN3Q9BQT9 956 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 TAOK3Q9H2K8 898 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 RMI1Q9H9A7 625 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 TLR8Q9NR97 1041 aaKnown RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 FLRT1Q9NZU1 646 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 KLQ9UEF7 1012 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 ZNHIT2Q9UHR6 403 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 ANAPC4Q9UJX5 808 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 CRYL1Q9Y2S2 319 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 RRP7AQ9Y3A4 280 aaKnown RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 PKP3Q9Y446 797 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 HEMK1Q9Y5R4 338 aaPredicted RBP2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 EMSYQ7Z589 1322 aa2.13□□□□□ -2.07
NUCKS1-202ENST00000464938 CCDC196A0A1B0GTZ2 297 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 TMEM232C9JQI7 657 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 DSCR3O14972 297 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 NPHP1O15259 732 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 METTL18O95568 372 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 PLAUP00749 431 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 TUBB4AP04350 444 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 WNT1P04628 370 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 ALDOCP09972 364 aaKnown RBP2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 LYL1P12980 280 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 PKMP14618 531 aaKnown RBP2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 BMP5P22003 454 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 RPS6KB1P23443 525 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 CNTFP26441 200 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 DDIT3P35638 169 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 RPS6KA3P51812 740 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 ZBTB16Q05516 673 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 FOXF2Q12947 444 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 TRPC3Q13507 836 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 SLC12A1Q13621 1099 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 ALKBH1Q13686 389 aaKnown RBP2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 KPNB1Q14974 876 aaKnown RBP2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 DAZAP2Q15038 168 aaPredicted RBP2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 DLGAP5Q15398 846 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 PLK5Q496M5 336 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 KIAA1755Q5JYT7 1200 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 LIPMQ5VYY2 423 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 KIAA1614Q5VZ46 1190 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 JAKMIP3Q5VZ66 844 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 PAPD7Q5XG87 772 aaKnown RBP2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 ATG16L1Q676U5 607 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 RETSATQ6NUM9 610 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 ZNF782Q6ZMW2 699 aaPredicted RBP2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 DEF8Q6ZN54 512 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 PTF1AQ7RTS3 328 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 GALNT7Q86SF2 657 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 TMEM200AQ86VY9 491 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 SCN4BQ8IWT1 228 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 GALNT16Q8N428 558 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 ESX1Q8N693 406 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 PNLDC1Q8NA58 520 aaKnown RBP2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 NAXEQ8NCW5 288 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 C2CD4CQ8TF44 421 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 NELL1Q92832 810 aa2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 ZNF764Q96H86 408 aaPredicted RBP2.12□□□□□ -2.07
NUCKS1-202ENST00000464938 FCRL5Q96RD9 977 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms