RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 DUOXA1Q1HG43 343 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 PLEKHG6Q3KR16 790 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 TTC31Q49AM3 519 aaPredicted RBP10.5□□□□□ -0.73
SF3A3-204ENST00000462258 ANO6Q4KMQ2 910 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 BRMS1LQ5PSV4 323 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 RNF219Q5W0B1 726 aaPredicted RBP10.5□□□□□ -0.73
SF3A3-204ENST00000462258 FBXL22Q6P050 247 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 SLC23A3Q6PIS1 610 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 RGL4Q8IZJ4 473 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 KDM1BQ8NB78 822 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 NEK11Q8NG66 645 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 CEP76Q8TAP6 659 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 MRGPRX3Q96LB0 322 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 NPY6RQ99463 290 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 GPR174Q9BXC1 333 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 NAT10Q9H0A0 1025 aaKnown RBP10.5□□□□□ -0.73
SF3A3-204ENST00000462258 HSD3B7Q9H2F3 369 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 PRSS16Q9NQE7 514 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 ITM2CQ9NQX7 267 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 METTL5Q9NRN9 209 aaKnown RBP10.5□□□□□ -0.73
SF3A3-204ENST00000462258 WSB2Q9NYS7 404 aaPredicted RBP10.5□□□□□ -0.73
SF3A3-204ENST00000462258 SUSD2Q9UGT4 822 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 VANGL2Q9ULK5 521 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 HS3ST4Q9Y661 456 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 ITIH6Q6UXX5 1313 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 GON4LQ3T8J9 2241 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 CACNA1EQ15878 2313 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 NUMA1Q14980 2115 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 PLXNA2O75051 1894 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 SIN3BO75182 1162 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 ADCY5O95622 1261 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 DNTTP04053 509 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 CYP1A1P04798 512 aaPredicted RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 SRPRAP08240 638 aaKnown RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 ATP1A3P13637 1013 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 PDGFRAP16234 1089 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 TFE3P19532 575 aaPredicted RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 STAT1P42224 750 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 CTSOP43234 321 aaPredicted RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 MAPK8P45983 427 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 NUMBP49757 651 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 IRAK1P51617 712 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 RPS14P62263 151 aaKnown RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 ZBTB16Q05516 673 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 DEUP1Q05D60 604 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 SLC12A1Q13621 1099 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 AUHQ13825 339 aaKnown RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 HNRNPA1L2Q32P51 320 aaKnown RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 SLC25A52Q3SY17 297 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 WDR45BQ5MNZ6 344 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 SYCP2LQ5T4T6 812 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 DAB2IPQ5VWQ8 1189 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 ZNF776Q68DI1 518 aaPredicted RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 CXorf57Q6NSI4 855 aaKnown RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 CAVIN1Q6NZI2 390 aaKnown RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 TRIM72Q6ZMU5 477 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 SND1Q7KZF4 910 aaKnown RBP eCLIP10.49□□□□□ -0.732e-7■□□□□ 10.8
SF3A3-204ENST00000462258 APTXQ7Z2E3 356 aaKnown RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 FAM124AQ86V42 546 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 DHX40Q8IX18 779 aaKnown RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 APCDD1Q8J025 514 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 CPA5Q8WXQ8 436 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 IGSF8Q969P0 613 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 NT5C3BQ969T7 300 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 PGAP3Q96FM1 320 aaPredicted RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 ZNF419Q96HQ0 510 aaPredicted RBP10.49□□□□□ -0.73
SF3A3-204ENST00000462258 ERGIC2Q96RQ1 377 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 TBCBQ99426 244 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 C11orf70Q9BRQ4 267 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 TKTL2Q9H0I9 626 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 MTG2Q9H4K7 406 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 FSCN3Q9NQT6 498 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 ARHGEF38Q9NXL2 777 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 SUN2Q9UH99 717 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 SLC6A14Q9UN76 642 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 ERVW-1Q9UQF0 538 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 PAXBP1Q9Y5B6 917 aa10.49□□□□□ -0.73
SF3A3-204ENST00000462258 ASCC3Q8N3C0 2202 aaKnown RBP10.48□□□□□ -0.73
SF3A3-204ENST00000462258 EDDM13A0A1B0GTR0 161 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 CDX4O14627 284 aaPredicted RBP10.48□□□□□ -0.73
SF3A3-204ENST00000462258 TM4SF5O14894 197 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 ADRB1P08588 477 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 SERPINF2P08697 491 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 C7P10643 843 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 CHRNB2P17787 502 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 MMP8P22894 467 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 MZF1P28698 734 aaPredicted RBP10.48□□□□□ -0.73
SF3A3-204ENST00000462258 RDXP35241 583 aaKnown RBP10.48□□□□□ -0.73
SF3A3-204ENST00000462258 CXCR3P49682 368 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 STK19P49842 368 aaPredicted RBP10.48□□□□□ -0.73
SF3A3-204ENST00000462258 ATXN3P54252 364 aaPredicted RBP10.48□□□□□ -0.73
SF3A3-204ENST00000462258 OXCT1P55809 520 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 ECT2LQ008S8 904 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 GFPT1Q06210 699 aaPredicted RBP10.48□□□□□ -0.73
SF3A3-204ENST00000462258 DCAF12L1Q5VU92 463 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 TRNP1Q6NT89 227 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 C14orf80Q86SX3 495 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 ZCCHC9Q8N567 271 aaKnown RBP10.48□□□□□ -0.73
SF3A3-204ENST00000462258 EMC1Q8N766 993 aa10.48□□□□□ -0.73
SF3A3-204ENST00000462258 CADM4Q8NFZ8 388 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms