RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 TACC1O75410 805 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 SCAF4O95104 1147 aaKnown RBP8.04□□□□□ -1.12
BRCC3-208ENST00000453705 CRTAMO95727 393 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 FGF4P08620 206 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 RSPH10BP0C881 870 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 HTR1BP28222 390 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 CCT8P50990 548 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 KRT76Q01546 638 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 TMEM62Q0P6H9 643 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 KYNUQ16719 465 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 UAP1L1Q3KQV9 507 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 USH1GQ495M9 461 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 BROXQ5VW32 411 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 DESI1Q6ICB0 168 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 DENND5AQ6IQ26 1287 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 RINT1Q6NUQ1 792 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 AGMOQ6ZNB7 445 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 NCCRP1Q6ZVX7 275 aaPredicted RBP8.04□□□□□ -1.12
BRCC3-208ENST00000453705 HERC6Q8IVU3 1022 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 C4orf19Q8IY42 314 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 CCDC13Q8IYE1 715 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 FBXW8Q8N3Y1 598 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 GSTCDQ8NEC7 633 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 DNERQ8NFT8 737 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 OR8K1Q8NGG5 319 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 CSGALNACT1Q8TDX6 532 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 SCFD1Q8WVM8 642 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 SLC5A11Q8WWX8 675 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 EFHD2Q96C19 240 aaPredicted RBP8.04□□□□□ -1.12
BRCC3-208ENST00000453705 INPP4AQ96PE3 977 aaPredicted RBP8.04□□□□□ -1.12
BRCC3-208ENST00000453705 ZNF518BQ9C0D4 1074 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 TAF1DQ9H5J8 278 aaPredicted RBP8.04□□□□□ -1.12
BRCC3-208ENST00000453705 BRF2Q9HAW0 419 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 SARS2Q9NP81 518 aaKnown RBP8.04□□□□□ -1.12
BRCC3-208ENST00000453705 A1CFQ9NQ94 594 aaKnown RBP8.04□□□□□ -1.12
BRCC3-208ENST00000453705 PXMP2Q9NR77 195 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 DMAC2Q9NW81 257 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 SAMD15Q9P1V8 674 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 ZNF214Q9UL59 606 aaPredicted RBP8.04□□□□□ -1.12
BRCC3-208ENST00000453705 PLXNB2O15031 1838 aa8.04□□□□□ -1.12
BRCC3-208ENST00000453705 TRPM7Q96QT4 1865 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 E9PMD0 336 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 RBAK-RBAKDNI3L0D1 243 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 EML1O00423 815 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 CXCL11O14625 94 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ASAP2O43150 1006 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ATP6V1G1O75348 118 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 GCATO75600 419 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 PABPC1P11940 636 aaKnown RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 NF2P35240 595 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ADRA1BP35368 520 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 DSTNP60981 165 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ALDH6A1Q02252 535 aaKnown RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 KDSRQ06136 332 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 GALNT3Q14435 633 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 PGM5Q15124 567 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 SGO1Q5FBB7 561 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 DPY19L2P1Q6NXN4 242 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 STXBP4Q6ZWJ1 553 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 RTN4RL1Q86UN2 441 aaPredicted RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ZDHHC16Q969W1 377 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 SIPA1Q96FS4 1042 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ETNK1Q9HBU6 452 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 PALMDQ9NP74 551 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 CCM2LQ9NUG4 571 aaPredicted RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 TAB2Q9NYJ8 693 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 COL20A1Q9P218 1284 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 PSME2Q9UL46 239 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 BACE2Q9Y5Z0 518 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 SSU72P8A0A1W2PR75 194 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 A0A1W2PRV1 198 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 USP27XA6NNY8 438 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 WDR64B1ANS9 1081 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 EBAG9O00559 213 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 CALUO43852 315 aaPredicted RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 SRGAP2CP0DJJ0 459 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 NCF1P14598 390 aaPredicted RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ITGB5P18084 799 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 PTBP1P26599 531 aaKnown RBP eCLIP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ACAA2P42765 397 aaKnown RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 BLVRAP53004 296 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 VCPP55072 806 aaKnown RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 RPS26P62854 115 aaKnown RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 FAM187BQ17R55 369 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 KNOP1Q1ED39 458 aaKnown RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 XKR9Q5GH70 373 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 P3H2Q8IVL5 708 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 MFSD2AQ8NA29 543 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 MYO19Q96H55 970 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 AGAP2Q99490 1192 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 PDCD2LQ9BRP1 358 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 THUMPD3Q9BV44 507 aaKnown RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ADNPQ9H2P0 1102 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 CHRDQ9H2X0 955 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 C17orf75Q9HAS0 396 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 IARS2Q9NSE4 1012 aaKnown RBP8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ASH2LQ9UBL3 628 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 DNAI1Q9UI46 699 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 ATPIF1Q9UII2 106 aa8.03□□□□□ -1.12
BRCC3-208ENST00000453705 CAPN7Q9Y6W3 813 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms