RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 FAM89AQ96GI7 184 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 HEXIM2Q96MH2 286 aaKnown RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 TWNKQ96RR1 684 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 HEMGNQ9BXL5 484 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 COQ10BQ9H8M1 238 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 GPBP1L1Q9HC44 474 aaPredicted RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 RPRD1BQ9NQG5 326 aaKnown RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 FBXO8Q9NRD0 319 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 CPSF3Q9UKF6 684 aaKnown RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 SNX7Q9UNH6 387 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 EML1O00423 815 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 AKAP10O43572 662 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 NDUFS2O75306 463 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 CD4P01730 458 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 HMGN1P05114 100 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 DLATP10515 647 aaKnown RBP10.97□□□□□ -0.65
LINC00342-202ENST00000448494 SLC9A1P19634 815 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 COMTP21964 271 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 L1CAMP32004 1257 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 TNFAIP2Q03169 654 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 RUNX1T1Q06455 604 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 TRIM32Q13049 653 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 UBE2SQ16763 222 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 ZFP69Q49AA0 526 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 ZNF704Q6ZNC4 412 aaPredicted RBP10.97□□□□□ -0.65
LINC00342-202ENST00000448494 CATSPER3Q86XQ3 398 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 MFSD4AQ8N468 514 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 LEMD2Q8NC56 503 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 PJA1Q8NG27 643 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 OR6F1Q8NGZ6 308 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 ZFPM2Q8WW38 1151 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 C1orf54Q8WWF1 131 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 TFAP2CQ92754 450 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 TSNARE1Q96NA8 513 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 YTHDF1Q9BYJ9 559 aaKnown RBP10.97□□□□□ -0.65
LINC00342-202ENST00000448494 SLC13A1Q9BZW2 595 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 THAP2Q9H0W7 228 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 C20orf96Q9NUD7 363 aaPredicted RBP10.97□□□□□ -0.65
LINC00342-202ENST00000448494 ADPRHL2Q9NX46 363 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 TOR4AQ9NXH8 423 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 COPG2Q9UBF2 871 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 GMEB2Q9UKD1 530 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 MKL2Q9ULH7 1088 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 WASLO00401 505 aaPredicted RBP10.97□□□□□ -0.65
LINC00342-202ENST00000448494 PLK4O00444 970 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 HTRA2O43464 458 aaPredicted RBP10.97□□□□□ -0.65
LINC00342-202ENST00000448494 SEC14L2O76054 403 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 CALML3P27482 149 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 HARS2P49590 506 aaKnown RBP10.97□□□□□ -0.65
LINC00342-202ENST00000448494 ST13P50502 369 aaKnown RBP10.97□□□□□ -0.65
LINC00342-202ENST00000448494 SLC18A2Q05940 514 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 ILF2Q12905 390 aaKnown RBP10.97□□□□□ -0.65
LINC00342-202ENST00000448494 AP3B2Q13367 1082 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 NHSL2Q5HYW2 709 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 FAM47AQ5JRC9 791 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 ATAD3CQ5T2N8 411 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 MFSD6Q6ZSS7 791 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 KCTD8Q6ZWB6 473 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 RIOX2Q8IUF8 465 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 LRRC20Q8TCA0 184 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 NRBF2Q96F24 287 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 ASB2Q96Q27 587 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 RTKNQ9BST9 563 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 SYT11Q9BT88 431 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 RAVER2Q9HCJ3 691 aaKnown RBP10.97□□□□□ -0.65
LINC00342-202ENST00000448494 MCM9Q9NXL9 1143 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
LINC00342-202ENST00000448494 A0A0B4J269 797 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 A0A0G2JMP0 313 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 RAD51BO15315 384 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 NDST3O95803 873 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 GH2P01242 217 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 ASNSP08243 561 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 BMP1P13497 986 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 CYP3A5P20815 502 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 RPL9P32969 192 aaKnown RBP10.96□□□□□ -0.65
LINC00342-202ENST00000448494 HTR2BP41595 481 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 MAPKAPK2P49137 400 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 CLCQ05315 142 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 BNIP2Q12982 314 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 TUBB3Q13509 450 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 AGAP6Q5VW22 663 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 TTBK2Q6IQ55 1244 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 ZNF544Q6NX49 715 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 DCUN1D2Q6PH85 259 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 NEK8Q86SG6 692 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 FBXO11Q86XK2 927 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 GLYCTKQ8IVS8 523 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 PIAS4Q8N2W9 510 aaPredicted RBP10.96□□□□□ -0.65
LINC00342-202ENST00000448494 SLAIN1Q8ND83 568 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 CIDECQ96AQ7 238 aaPredicted RBP10.96□□□□□ -0.65
LINC00342-202ENST00000448494 AGAP4Q96P64 663 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 FAM111AQ96PZ2 611 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 PDGFDQ9GZP0 370 aaPredicted RBP10.96□□□□□ -0.65
LINC00342-202ENST00000448494 XPNPEP1Q9NQW7 623 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 EMC3Q9P0I2 261 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 TCAF1Q9Y4C2 921 aa10.96□□□□□ -0.65
LINC00342-202ENST00000448494 FAM170AA1A519 330 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 TOR1AO14656 332 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 PTTG1O95997 202 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms