RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 WDTC1Q8N5D0 677 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 KDF1Q8NAX2 398 aaPredicted RBP21.74■■□□□ 1.07
VSX1-206ENST00000444511 TM9SF3Q9HD45 589 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 OSGEPQ9NPF4 335 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 FBXL12Q9NXK8 326 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 COX16Q9P0S2 106 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 PCDHGC3Q9UN70 934 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 EDDM13A0A1B0GTR0 161 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 TARSL2A2RTX5 802 aaKnown RBP21.73■■□□□ 1.07
VSX1-206ENST00000444511 FAM47DPA6NHR8 397 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 TTC34A8MYJ7 566 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 HSF2BPO75031 334 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 CD27P26842 260 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 CCR1P32246 355 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 CST6Q15828 149 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 RABGAP1LQ5R372 815 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 C9orf64Q5T6V5 341 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 APCDD1Q8J025 514 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 SLC2A13Q96QE2 648 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 ASNSD1Q9NWL6 643 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 DNAJC12Q9UKB3 198 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 PCOLCE2Q9UKZ9 415 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 PCNX2A6NKB5 2137 aa21.73■■□□□ 1.07
VSX1-206ENST00000444511 MID1O15344 667 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 GRAP2O75791 330 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 FTH1P19P0C7X4 201 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 KRT9P35527 623 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 NNMTP40261 264 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 GRIA4P48058 902 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 SNX16P57768 344 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 EIF4EBP2Q13542 120 aaPredicted RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 SLC12A1Q13621 1099 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 KIF19Q2TAC6 998 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 TTC39BQ5VTQ0 682 aaPredicted RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 KIAA0895LQ68EN5 471 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 SMYD5Q6GMV2 418 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 OR6B2Q6IFH4 312 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 C11orf57Q6ZUT1 292 aaPredicted RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 RAB44Q7Z6P3 723 aaPredicted RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 CIR1Q86X95 450 aaPredicted RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 MMAAQ8IVH4 418 aaKnown RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 FAM114A1Q8IWE2 563 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 CCAR2Q8N163 923 aaKnown RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 C1orf131Q8NDD1 294 aaKnown RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 RPL10LQ96L21 214 aaKnown RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 PRMT1Q99873 361 aaKnown RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 OMDQ99983 421 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 SYNCQ9H7C4 482 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 SLCO3A1Q9UIG8 710 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 APOBEC2Q9Y235 224 aaKnown RBP21.72■■□□□ 1.07
VSX1-206ENST00000444511 ANKRD6Q9Y2G4 727 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 SNX11Q9Y5W9 270 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 FRYQ5TBA9 3013 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 ITIH6Q6UXX5 1313 aa21.72■■□□□ 1.07
VSX1-206ENST00000444511 A0A1B0GVM2 712 aa21.71■■□□□ 1.07
VSX1-206ENST00000444511 A0A1W2PP55 124 aa21.71■■□□□ 1.07
VSX1-206ENST00000444511 TCAF2A6NFQ2 919 aa21.71■■□□□ 1.07
VSX1-206ENST00000444511 CBFA2T3O75081 653 aa21.71■■□□□ 1.07
VSX1-206ENST00000444511 RNASEH2AO75792 299 aaKnown RBP21.71■■□□□ 1.07
VSX1-206ENST00000444511 SUZ12Q15022 739 aaKnown RBP21.71■■□□□ 1.07
VSX1-206ENST00000444511 MAN2A1Q16706 1144 aa21.71■■□□□ 1.07
VSX1-206ENST00000444511 FAM183BPQ6ZVS7 135 aa21.71■■□□□ 1.07
VSX1-206ENST00000444511 ADAT2Q7Z6V5 191 aaKnown RBP21.71■■□□□ 1.07
VSX1-206ENST00000444511 ZCCHC14Q8WYQ9 949 aaKnown RBP21.71■■□□□ 1.07
VSX1-206ENST00000444511 SIX2Q9NPC8 291 aa21.71■■□□□ 1.07
VSX1-206ENST00000444511 CHMP5Q9NZZ3 219 aa21.71■■□□□ 1.07
VSX1-206ENST00000444511 SERGEFQ9UGK8 458 aa21.71■■□□□ 1.07
VSX1-206ENST00000444511 AJAP1Q9UKB5 411 aaPredicted RBP21.71■■□□□ 1.07
VSX1-206ENST00000444511 PCDHGB2Q9Y5G2 931 aa21.71■■□□□ 1.07
VSX1-206ENST00000444511 FOXN3O00409 490 aaPredicted RBP21.7■■□□□ 1.06
VSX1-206ENST00000444511 FLRT2O43155 660 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 ERBB2P04626 1255 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 IGHV4-34P06331 123 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 PDGFRAP16234 1089 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 SLC8A1P32418 973 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 PSMD8P48556 350 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 NUMBP49757 651 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 STK19P49842 368 aaPredicted RBP21.7■■□□□ 1.06
VSX1-206ENST00000444511 GALCP54803 685 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 OXCT1P55809 520 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 SULT2A1Q06520 285 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 NME3Q13232 169 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 MTA1Q13330 715 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 LRSAM1Q6UWE0 723 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 LAYNQ6UX15 382 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 GLRX5Q86SX6 157 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 SLC47A2Q86VL8 602 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 PNPLA1Q8N8W4 532 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 ADAMTS14Q8WXS8 1223 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 RPRD1AQ96P16 312 aaPredicted RBP21.7■■□□□ 1.06
VSX1-206ENST00000444511 NEUROG2Q9H2A3 272 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 FZD4Q9ULV1 537 aa21.7■■□□□ 1.06
VSX1-206ENST00000444511 LRRC72A6NJI9 287 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 ADH1BP00325 375 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 PNMA6AP0CW24 399 aaPredicted RBP21.69■■□□□ 1.06
VSX1-206ENST00000444511 PRKCSHP14314 528 aaPredicted RBP21.69■■□□□ 1.06
VSX1-206ENST00000444511 FBXL22Q6P050 247 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 NCEH1Q6PIU2 408 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 OLFML1Q6UWY5 402 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 STK40Q8N2I9 435 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms