RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 NUMBP49757 651 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 NRG1Q02297 640 aaPredicted RBP22.68■■□□□ 1.22
VSX1-205ENST00000429762 BBS9Q3SYG4 887 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 LILRA6Q6PI73 481 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 SH2D3CQ8N5H7 860 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 RTL3Q8N8U3 475 aaKnown RBP22.68■■□□□ 1.22
VSX1-205ENST00000429762 USP33Q8TEY7 942 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 SLC22A12Q96S37 553 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 CYP2S1Q96SQ9 504 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 CDK5RAP1Q96SZ6 601 aaKnown RBP22.68■■□□□ 1.22
VSX1-205ENST00000429762 PRMT1Q99873 361 aaKnown RBP22.68■■□□□ 1.22
VSX1-205ENST00000429762 WDR83Q9BRX9 315 aaKnown RBP22.68■■□□□ 1.22
VSX1-205ENST00000429762 TSPYL1Q9H0U9 437 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 IL21Q9HBE4 155 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 STK39Q9UEW8 545 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 HBS1LQ9Y450 684 aaKnown RBP22.68■■□□□ 1.22
VSX1-205ENST00000429762 OBSL1O75147 1896 aa22.68■■□□□ 1.22
VSX1-205ENST00000429762 NUDT17P0C025 328 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 ARL4CP56559 192 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 RING1Q06587 406 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 ZBTB17Q13105 803 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 KRT71Q3SY84 523 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 RFWD3Q6PCD5 774 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 CENPUQ71F23 418 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 TADA2BQ86TJ2 420 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 NLRP14Q86W24 1093 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 KREMEN2Q8NCW0 462 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 MICAL1Q8TDZ2 1067 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 SLC22A17Q8WUG5 538 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 HDAC11Q96DB2 347 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 FOXP3Q9BZS1 431 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 RAD54BQ9Y620 910 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 DOCK4Q8N1I0 1966 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 TRDMT1O14717 391 aaKnown RBP22.67■■□□□ 1.22
VSX1-205ENST00000429762 NDC80O14777 642 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 GRM6O15303 877 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 CHADO15335 359 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 STK10O94804 968 aaKnown RBP22.67■■□□□ 1.22
VSX1-205ENST00000429762 F11P03951 625 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 MX2P20592 715 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 PSMB4P28070 264 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 SLC6A4P31645 630 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 CYP4F8P98187 520 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 LRRC31Q6UY01 552 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 DENND1CQ8IV53 801 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 EPS8L3Q8TE67 593 aaKnown RBP22.67■■□□□ 1.22
VSX1-205ENST00000429762 RPRD1AQ96P16 312 aaPredicted RBP22.67■■□□□ 1.22
VSX1-205ENST00000429762 ZYG11BQ9C0D3 744 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 TMBIM4Q9HC24 238 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 TLR9Q9NR96 1032 aa22.67■■□□□ 1.22
VSX1-205ENST00000429762 KLHL8Q9P2G9 620 aaPredicted RBP22.67■■□□□ 1.22
VSX1-205ENST00000429762 CHD7Q9P2D1 2997 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 OAS1P00973 400 aaKnown RBP22.66■■□□□ 1.22
VSX1-205ENST00000429762 LRG1P02750 347 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 CA3P07451 260 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 TACR2P21452 398 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 HTR7P34969 479 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 SLCO1A2P46721 670 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 NUGGCQ68CJ6 796 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 TXNDC8Q6A555 127 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 LGI2Q8N0V4 545 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 CFAP52Q8N1V2 620 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 MRPL43Q8N983 215 aaKnown RBP22.66■■□□□ 1.22
VSX1-205ENST00000429762 TTC16Q8NEE8 873 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 EMILIN2Q9BXX0 1053 aa22.66■■□□□ 1.22
VSX1-205ENST00000429762 NOL6Q9H6R4 1146 aaKnown RBP22.66■■□□□ 1.22
VSX1-205ENST00000429762 BCCIPQ9P287 314 aaKnown RBP eCLIP22.66■■□□□ 1.22
VSX1-205ENST00000429762 TLDC2A0PJX2 215 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 CCL16O15467 120 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 KLKB1P03952 638 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 GJA1P17302 382 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 KPNA1P52294 538 aaPredicted RBP22.65■■□□□ 1.22
VSX1-205ENST00000429762 SHHQ15465 462 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 PID1Q7Z2X4 250 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 ITIH5Q86UX2 942 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 ZNF276Q8N554 614 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 ATPAF2Q8N5M1 289 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.65■■□□□ 1.22
VSX1-205ENST00000429762 AGAP3Q96P47 875 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 UXTQ9UBK9 157 aaPredicted RBP22.65■■□□□ 1.22
VSX1-205ENST00000429762 LZTS1Q9Y250 596 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 GOLGA8KD6RF30 607 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 E7EVH7 732 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 NCAM2O15394 837 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 STC2O76061 302 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 GLUD1P00367 558 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 MBL2P11226 248 aaPredicted RBP22.65■■□□□ 1.22
VSX1-205ENST00000429762 GABRR2P28476 465 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 CORO1AP31146 461 aaKnown RBP22.65■■□□□ 1.22
VSX1-205ENST00000429762 GRIA1P42261 906 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 AGGF1Q8N302 714 aaeCLIP22.65■■□□□ 1.22
VSX1-205ENST00000429762 ARL14EPQ8N8R7 260 aaPredicted RBP22.65■■□□□ 1.22
VSX1-205ENST00000429762 SERPINB12Q96P63 405 aa22.65■■□□□ 1.22
VSX1-205ENST00000429762 KLF16Q9BXK1 252 aaPredicted RBP22.65■■□□□ 1.22
VSX1-205ENST00000429762 ALOX15BO15296 676 aa22.64■■□□□ 1.21
VSX1-205ENST00000429762 ZBTB24O43167 697 aaPredicted RBP22.64■■□□□ 1.21
VSX1-205ENST00000429762 ACSL4O60488 711 aa22.64■■□□□ 1.21
VSX1-205ENST00000429762 OPHN1O60890 802 aa22.64■■□□□ 1.21
VSX1-205ENST00000429762 MYZAPP0CAP1 466 aa22.64■■□□□ 1.21
VSX1-205ENST00000429762 RHOQP17081 205 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms