RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 IFI35P80217 286 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 FMO1Q01740 532 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 PPARDQ03181 441 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 RING1Q06587 406 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 AP1B1Q10567 949 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 STK38Q15208 465 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 CNGA2Q16280 664 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 NKG7Q16617 165 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 TPD52L1Q16890 204 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 C3orf36Q3SXR2 165 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 LRIT3Q3SXY7 679 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 MMEL1Q495T6 779 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 TMEM119Q4V9L6 283 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 ZBTB37Q5TC79 503 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 KRT79Q5XKE5 535 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 ESRP1Q6NXG1 681 aaKnown RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 SLC30A9Q6PML9 568 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 SARM1Q6SZW1 724 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 SLCO4C1Q6ZQN7 724 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 MICALCLQ6ZW33 695 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 NLRP14Q86W24 1093 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 HERC6Q8IVU3 1022 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 CCAR2Q8N163 923 aaKnown RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 PLD6Q8N2A8 252 aaKnown RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 CEP112Q8N8E3 955 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 LINC00301Q8NCQ3 95 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 RASSF8Q8NHQ8 419 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 STT3BQ8TCJ2 826 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 STYXQ8WUJ0 223 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 PRPF31Q8WWY3 499 aaKnown RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 SEPT8Q92599 483 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 EVPLQ92817 2033 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 RGMAQ96B86 450 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 RBM41Q96IZ5 413 aaKnown RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 EPSTI1Q96J88 318 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 FDXACB1Q9BRP7 624 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 KIFC3Q9BVG8 833 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 RAB34Q9BZG1 259 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 C2orf40Q9H1Z8 148 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 OR10A4Q9H209 315 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 MMADHCQ9H3L0 296 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 SOX17Q9H6I2 414 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 MINDY3Q9H8M7 445 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 TRPV4Q9HBA0 871 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 ERVK-5Q9HDB9 667 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 GPATCH2Q9NW75 528 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 PADI3Q9ULW8 664 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 RNF112Q9ULX5 631 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 ST3GAL5Q9UNP4 418 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 SF3B6Q9Y3B4 125 aaKnown RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 MTF2Q9Y483 593 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-202ENST00000409915 BACE2Q9Y5Z0 518 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 EYSQ5T1H1 3165 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 PTPRSQ13332 1948 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 MYH15Q9Y2K3 1946 aa4.76□□□□□ -1.65
SF3B1-202ENST00000409915 KDM3AQ9Y4C1 1321 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 A0A1W2PPL8 197 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 GOLGA6L10A6NI86 522 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 LRRIQ4A6NIV6 560 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 FAM47E-STBD1D6RA91 191 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 H0Y626 953 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 ARNTLO00327 626 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 AP3D1O14617 1153 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 SPTLC2O15270 562 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 SLC7A4O43246 635 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 MGRN1O60291 552 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 RNF8O76064 485 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 GOSR1O95249 250 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 TNFRSF6BO95407 300 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 RPLP2P05387 115 aaKnown RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 CA3P07451 260 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 P4HA1P13674 534 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 DARSP14868 501 aaKnown RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 JUPP14923 745 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 GLRA2P23416 452 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 ATP5F1P24539 256 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 PTX3P26022 381 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 SLC8A1P32418 973 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 GRK3P35626 688 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 LONP1P36776 959 aaKnown RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 AARSP49588 968 aaKnown RBP eCLIP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 AFF3P51826 1226 aaKnown RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 CRYBB1P53674 252 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 BCAR1P56945 870 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 PHEXP78562 749 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 UBE3AQ05086 875 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 LAMTOR4Q0VGL1 99 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 SNX1Q13596 522 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 CAPSQ13938 189 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 FGL2Q14314 439 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 SLC39A14Q15043 492 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 PABPC1LQ4VXU2 614 aaKnown RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 SETMARQ53H47 684 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 UBXN11Q5T124 520 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 ARL6IP4Q66PJ3 421 aaKnown RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 TANGO2Q6ICL3 276 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 FSTL4Q6MZW2 842 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 C16orf87Q6PH81 154 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 ABRAXAS1Q6UWZ7 409 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms