RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TRDMT1O14717 391 aaKnown RBP15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 MSI1O43347 362 aaKnown RBP15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 ZNF623O75123 536 aa15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 FAM163BP0C2L3 166 aa15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 FDFT1P37268 417 aa15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 C4orf22Q6V702 233 aa15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 PID1Q7Z2X4 250 aa15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 KLHL23Q8NBE8 558 aa15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 OR52K1Q8NGK4 314 aa15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 DQX1Q8TE96 717 aaKnown RBP15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 PRR11Q96HE9 360 aaPredicted RBP15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 ZNF419Q96HQ0 510 aaPredicted RBP15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 YIPF3Q9GZM5 350 aa15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 VPS11Q9H270 941 aa15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 KLHL8Q9P2G9 620 aaPredicted RBP15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 NEU3Q9UQ49 428 aa15.58■□□□□ 0.08
SCAMP4-202ENST00000409472 CFAP73A6NFT4 308 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 KRT37O76014 449 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 TOMM70O94826 608 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 KRT16P08779 473 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 TARSP26639 723 aaKnown RBP15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 CD68P34810 354 aaPredicted RBP15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 CCNFP41002 786 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 NIPAL4Q0D2K0 466 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 MBTPS1Q14703 1052 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 STEAP4Q687X5 459 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 LRRC8BQ6P9F7 803 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 ARHGAP36Q6ZRI8 547 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 ZNF280BQ86YH2 543 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 SLC9A7Q96T83 725 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 APOL2Q9BQE5 337 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 OR12D3Q9UGF7 316 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 USH1CQ9Y6N9 552 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 LAMA2P24043 3122 aaKnown RBP15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 ZBTB24O43167 697 aaPredicted RBP15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 EPHB2P29323 1055 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 TM4SF4P48230 202 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 CXCR3P49682 368 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 TUSC3Q13454 348 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 THEMIS2Q5TEJ8 643 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 CWF19L1Q69YN2 538 aaKnown RBP15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 OVOS1Q6IE37 1185 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 RTN4RL1Q86UN2 441 aaPredicted RBP15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 LINC01599Q8WXQ3 324 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 PGAP3Q96FM1 320 aaPredicted RBP15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 ACBD6Q9BR61 282 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 MLPHQ9BV36 600 aaPredicted RBP15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 TSSK1BQ9BXA7 367 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 WDCPQ9H6R7 721 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 UBP1Q9NZI7 540 aa15.57■□□□□ 0.08
SCAMP4-202ENST00000409472 E2F8A0AVK6 867 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 M0QZQ0 153 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 CBX6O95503 412 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 PAPOLAP51003 745 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 NKX3-2P78367 333 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 IRX4P78413 519 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 ROR2Q01974 943 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 BLMHQ13867 455 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 SDHAF4Q5VUM1 108 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 ASRGL1Q7L266 308 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 NLRP9Q7RTR0 991 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 ZNF598Q86UK7 904 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 CHSY1Q86X52 802 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 APLFQ8IW19 511 aaPredicted RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 FCRL3Q96P31 734 aaPredicted RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 DMAP1Q9NPF5 467 aaPredicted RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 EIF2B3Q9NR50 452 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 NOD1Q9Y239 953 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 PLLPQ9Y342 182 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 A0A0G2JND7 137 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 SDR42E2A6NKP2 422 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 STK10O94804 968 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 DDHD2O94830 711 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 ALDOAP04075 364 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 CYP11A1P05108 521 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 ERVK-10P10266 1014 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 NQO1P15559 274 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 PPIDQ08752 370 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 ITGA7Q13683 1181 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 PARP6Q2NL67 630 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 PM20D1Q6GTS8 502 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 ZNF449Q6P9G9 518 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 NDUFAF2Q8N183 169 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 KLHL29Q96CT2 875 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 TRPV6Q9H1D0 765 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 SFMBT1Q9UHJ3 866 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 CASP8AP2Q9UKL3 1982 aa15.56■□□□□ 0.08
SCAMP4-202ENST00000409472 MKI67P46013 3256 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 ALDH1A2O94788 518 aa15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 SRGAP2BP0DMP2 458 aa15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 CCNB1P14635 433 aa15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 ABCG1P45844 678 aa15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 GBP7Q8N8V2 638 aaPredicted RBP15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 UTP4Q969X6 686 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 LRRC37BQ96QE4 947 aa15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 TSC22D3Q99576 134 aa15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 SIK2Q9H0K1 926 aa15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 KCNK13Q9HB14 408 aa15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 IGSF9Q9P2J2 1179 aa15.55■□□□□ 0.08
SCAMP4-202ENST00000409472 HAO1Q9UJM8 370 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms