RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SLC15A5A6NIM6 579 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 FAM200BP0CF97 657 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 SLC12A2P55011 1212 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 MRPS35P82673 323 aaKnown RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 MRPS5P82675 430 aaKnown RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 TRIM32Q13049 653 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 CUL3Q13618 768 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 C9orf57Q5W0N0 161 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 STRA8Q7Z7C7 330 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 PQLC3Q8N755 202 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 HTR3CQ8WXA8 447 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 ZNF333Q96JL9 665 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 EXOC2Q96KP1 924 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 FGD4Q96M96 766 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 DHRS4Q9BTZ2 278 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 FRMD8P1Q9BZ68 369 aaPredicted RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 TKTL2Q9H0I9 626 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 TASP1Q9H6P5 420 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 TMEM165Q9HC07 324 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 SSU72Q9NP77 194 aaKnown RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 PNPOQ9NVS9 261 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 NDE1Q9NXR1 346 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 SLC27A5Q9Y2P5 690 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 LRRC42Q9Y546 428 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 MYADML2A6NDP7 307 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 A8MX80 341 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 ITM2AO43736 263 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 HNRNPCL1O60812 293 aaKnown RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 SNUPNO95149 360 aaKnown RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 GNAT1P11488 350 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 TGM2P21980 687 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 ATN1P54259 1190 aaPredicted RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 PLPPR4Q7Z2D5 763 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 CIR1Q86X95 450 aaPredicted RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 MYLK4Q86YV6 388 aaPredicted RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 ST13P5Q8NFI4 369 aaPredicted RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 RNF139Q8WU17 664 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 USP13Q92995 863 aaPredicted RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 P2RY11Q96G91 374 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 MAML3Q96JK9 1138 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 GBP5Q96PP8 586 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 KLHL5Q96PQ7 755 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 CSPG4P5Q96PW8 444 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 TMEM209Q96SK2 561 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 NDNQ99608 321 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 WDCPQ9H6R7 721 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 APOBEC2Q9Y235 224 aaKnown RBP13.71□□□□□ -0.21
COL6A2-204ENST00000409416 IPPQ9Y573 584 aa13.71□□□□□ -0.21
COL6A2-204ENST00000409416 SPAG6O75602 509 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 IRF1P10914 325 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 ERCC2P18074 760 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 TAF12Q16514 161 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 DDR2Q16832 855 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 OSTM1Q86WC4 334 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 CDKL3Q8IVW4 592 aaPredicted RBP13.71□□□□□ -0.22
COL6A2-204ENST00000409416 B3GALNT2Q8NCR0 500 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 GSDMBQ8TAX9 411 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 FSD1LQ9BXM9 530 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 V9GYQ6 96 aa13.71□□□□□ -0.22
COL6A2-204ENST00000409416 MAP3K13O43283 966 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 OPHN1O60890 802 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 SNX17Q15036 470 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 ULK2Q8IYT8 1036 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 SEPT5Q99719 369 aaPredicted RBP13.7□□□□□ -0.22
COL6A2-204ENST00000409416 C16orf70Q9BSU1 422 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 ARHGAP39Q9C0H5 1083 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 CHRAC1Q9NRG0 131 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 TAGLN3Q9UI15 199 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 ANGPTL2Q9UKU9 493 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 UBQLN1Q9UMX0 589 aaKnown RBP13.7□□□□□ -0.22
COL6A2-204ENST00000409416 SCN1AP35498 2009 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 ABLIM1O14639 778 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 RFPL1O75677 317 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 CHRNA4P43681 627 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 CACNA2D1P54289 1103 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 CSE1LP55060 971 aaKnown RBP13.7□□□□□ -0.22
COL6A2-204ENST00000409416 SLC18A2Q05940 514 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 BST2Q10589 180 aaKnown RBP13.7□□□□□ -0.22
COL6A2-204ENST00000409416 PPIL2Q13356 520 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 RALGPS1Q5JS13 557 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 CES4AQ5XG92 561 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 TAPT1Q6NXT6 567 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 ZNF778Q96MU6 729 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 BCO2Q9BYV7 579 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 ASB7Q9H672 318 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 CDY2AQ9Y6F7 541 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 IGKV6D-21A0A0A0MT36 114 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 KLHL33A6NCF5 533 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 SORBS2O94875 1100 aaKnown RBP13.7□□□□□ -0.22
COL6A2-204ENST00000409416 TBX18O95935 607 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 USP10Q14694 798 aaKnown RBP13.7□□□□□ -0.22
COL6A2-204ENST00000409416 GRAMD1BQ3KR37 738 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 RASIP1Q5U651 963 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 GPRIN1Q7Z2K8 1008 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 CHSY1Q86X52 802 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 TMPRSS6Q8IU80 811 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 ENDOVQ8N8Q3 282 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms