RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 PLIN5Q00G26 463 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 KLF10Q13118 480 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 POU6F1Q14863 301 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 ZNF354CQ86Y25 554 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 RNF34Q969K3 372 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 ATP6V1E2Q96A05 226 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 CMTM5Q96DZ9 223 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 PHF21BQ96EK2 531 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 TEPSINQ96N21 525 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 KCTD15Q96SI1 283 aaPredicted RBP17.14■□□□□ 0.33
SIPA1-201ENST00000394224 GMLQ99445 158 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 AURKCQ9UQB9 309 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 NUP205Q92621 2012 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 SIPA1L1O43166 1804 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 SERPINE1P05121 402 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 SULT1E1P49888 294 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 SLC10A6Q3KNW5 377 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 PAN2Q504Q3 1202 aaKnown RBP17.14■□□□□ 0.33
SIPA1-201ENST00000394224 TMC7Q7Z402 723 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 ZNF512Q96ME7 567 aaPredicted RBP17.14■□□□□ 0.33
SIPA1-201ENST00000394224 CSPG4P5Q96PW8 444 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 NPM3O75607 178 aaKnown RBP17.14■□□□□ 0.33
SIPA1-201ENST00000394224 SLC4A1P02730 911 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 PTPN1P18031 435 aaKnown RBP17.14■□□□□ 0.33
SIPA1-201ENST00000394224 PCSK6P29122 969 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 CHN2P52757 468 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 KCTD4Q8WVF5 259 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 TFPTP0C1Z6 253 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 INSRRP14616 1297 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 ARF4P18085 180 aaPredicted RBP17.13■□□□□ 0.33
SIPA1-201ENST00000394224 USP10Q14694 798 aaKnown RBP17.13■□□□□ 0.33
SIPA1-201ENST00000394224 ANO4Q32M45 955 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 ARHGAP17Q68EM7 881 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 FSTL4Q6MZW2 842 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 RWDD4Q6NW29 188 aaKnown RBP17.13■□□□□ 0.33
SIPA1-201ENST00000394224 GK5Q6ZS86 529 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 UTS2BQ765I0 119 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 SLC2A14Q8TDB8 520 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 SORT1Q99523 831 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 MMADHCQ9H3L0 296 aaPredicted RBP17.13■□□□□ 0.33
SIPA1-201ENST00000394224 GNEQ9Y223 722 aaKnown RBP17.13■□□□□ 0.33
SIPA1-201ENST00000394224 TRIP11Q15643 1979 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 UGT1A6P19224 532 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 EFNA5P52803 228 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 TMEM259Q4ZIN3 620 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 FAM110BQ8TC76 370 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 ANKRD27Q96NW4 1050 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 CIB1Q99828 191 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 PCDHGC3Q9UN70 934 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 PCDHA11Q9Y5I1 949 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 STYXL1Q9Y6J8 313 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 M0QYT0 321 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 KLHL2O95198 593 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 DESP17661 470 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 R3HDM1Q15032 1099 aaKnown RBP17.13■□□□□ 0.33
SIPA1-201ENST00000394224 PCSK7Q16549 785 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 BOLA3Q53S33 107 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 DEFB106AQ8N104 65 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 FBXW8Q8N3Y1 598 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 NIPA2Q8N8Q9 360 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 IFT43Q96FT9 208 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 MED10Q9BTT4 135 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 PPCSQ9HAB8 311 aa17.13■□□□□ 0.33
SIPA1-201ENST00000394224 SSU72Q9NP77 194 aaKnown RBP17.13■□□□□ 0.33
SIPA1-201ENST00000394224 SOWAHBA6NEL2 793 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 MAFO75444 373 aaPredicted RBP17.12■□□□□ 0.33
SIPA1-201ENST00000394224 CKMT2P17540 419 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 CRABP2P29373 138 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 ITGA7Q13683 1181 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 DGKDQ16760 1214 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 TRAPPC9Q96Q05 1148 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 PKP2Q99959 881 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 GIMAP2Q9UG22 337 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 CNTN6Q9UQ52 1028 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 RUVBL2Q9Y230 463 aaKnown RBP17.12■□□□□ 0.33
SIPA1-201ENST00000394224 MAFGO15525 162 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 EPHX2P34913 555 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 FDFT1P37268 417 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 CDKL1Q00532 357 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 ADIGQ0VDE8 80 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 WASHC5Q12768 1159 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 TNFAIP1Q13829 316 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 PRPSAP1Q14558 356 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 LSM12Q3MHD2 195 aaKnown RBP17.12■□□□□ 0.33
SIPA1-201ENST00000394224 ARL13AQ5H913 290 aaPredicted RBP17.12■□□□□ 0.33
SIPA1-201ENST00000394224 LDB1Q86U70 411 aaPredicted RBP17.12■□□□□ 0.33
SIPA1-201ENST00000394224 CDKL3Q8IVW4 592 aaPredicted RBP17.12■□□□□ 0.33
SIPA1-201ENST00000394224 DSELQ8IZU8 1212 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 MCRS1Q96EZ8 462 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 GATA5Q9BWX5 397 aaPredicted RBP17.12■□□□□ 0.33
SIPA1-201ENST00000394224 DMAP1Q9NPF5 467 aaPredicted RBP17.12■□□□□ 0.33
SIPA1-201ENST00000394224 TLK1Q9UKI8 766 aa17.12■□□□□ 0.33
SIPA1-201ENST00000394224 SAC3D1A6NKF1 404 aa17.11■□□□□ 0.33
SIPA1-201ENST00000394224 FAM189A1O60320 539 aa17.11■□□□□ 0.33
SIPA1-201ENST00000394224 GLRA3O75311 464 aa17.11■□□□□ 0.33
SIPA1-201ENST00000394224 C2P06681 752 aa17.11■□□□□ 0.33
SIPA1-201ENST00000394224 HNRNPCP07910 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
SIPA1-201ENST00000394224 MX2P20592 715 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms