RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 PLAC1Q9HBJ0 212 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 MOV10Q9HCE1 1003 aaKnown RBP9.77□□□□□ -0.84
SF3A3-201ENST00000373019 AVENQ9NQS1 362 aaPredicted RBP9.77□□□□□ -0.84
SF3A3-201ENST00000373019 SMOXQ9NWM0 555 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 ZNRF3Q9ULT6 936 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 TEX264Q9Y6I9 313 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 CLDN25C9JDP6 229 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 GPR25O00155 361 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
SF3A3-201ENST00000373019 BCL10O95999 233 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 SNRPAP09012 282 aaKnown RBP9.77□□□□□ -0.85
SF3A3-201ENST00000373019 TSHRP16473 764 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 CKMT2P17540 419 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 ATF7P17544 494 aaPredicted RBP9.77□□□□□ -0.85
SF3A3-201ENST00000373019 MAP4P27816 1152 aaKnown RBP9.77□□□□□ -0.85
SF3A3-201ENST00000373019 CRHR1P34998 444 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 PTPN9P43378 593 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 IST1P53990 364 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 CARTPTQ16568 116 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 AGMOQ6ZNB7 445 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 KCTD8Q6ZWB6 473 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 PCGF5Q86SE9 256 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 OR13F1Q8NGS4 319 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 CPA5Q8WXQ8 436 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 ELMO3Q96BJ8 720 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 ACO2Q99798 780 aaKnown RBP9.77□□□□□ -0.85
SF3A3-201ENST00000373019 MUC3BQ9H195 1237 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 DHX33Q9H6R0 707 aaKnown RBP9.77□□□□□ -0.85
SF3A3-201ENST00000373019 MKNK2Q9HBH9 465 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 AKIP1Q9NQ31 210 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 SAE1Q9UBE0 346 aaPredicted RBP9.77□□□□□ -0.85
SF3A3-201ENST00000373019 TCAF1Q9Y4C2 921 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 USP17L5A8MUK1 530 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 SLC22A1O15245 554 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 SLC26A4O43511 780 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 LDHBP07195 334 aaKnown RBP9.77□□□□□ -0.85
SF3A3-201ENST00000373019 SLC16A2P36021 539 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 ETFBP38117 255 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 SLC10A5Q5PT55 438 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 UGT3A1Q6NUS8 523 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 PLEKHG7Q6ZR37 379 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 KYQ8NBH2 561 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 ZSWIM2Q8NEG5 633 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 TMA16Q96EY4 203 aaKnown RBP9.77□□□□□ -0.85
SF3A3-201ENST00000373019 IL12RB2Q99665 862 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 ATP13A3Q9H7F0 1226 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 SMYD2Q9NRG4 433 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 HACD3Q9P035 362 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 PCDHAC2Q9Y5I4 1007 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 PTPRFP10586 1907 aa9.77□□□□□ -0.85
SF3A3-201ENST00000373019 COL5A3P25940 1745 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 COL24A1Q17RW2 1714 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 MYF6P23409 242 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 TMBIM6P55061 237 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 GRAPQ13588 217 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 PCSK7Q16549 785 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 RINT1Q6NUQ1 792 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 DPP8Q6V1X1 898 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 CHST15Q7LFX5 561 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 ZNF720Q7Z2F6 126 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 LSMEM1Q8N8F7 131 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 CXorf38Q8TB03 319 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 SLC35B2Q8TB61 432 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 GRAPLQ8TC17 118 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 TXNDC15Q96J42 360 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 CNDP2Q96KP4 475 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 SGIP1Q9BQI5 828 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 RNF181Q9P0P0 153 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 SERPINB13Q9UIV8 391 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 EMCNQ9ULC0 261 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 TMCC2O75069 709 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 TBCAO75347 108 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 AVILO75366 819 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 P4HBP07237 508 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 AKR1B1P15121 316 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 ME2P23368 584 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 SSTR3P32745 418 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 IFNA8P32881 189 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 RPL22P35268 128 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 SERPINB5P36952 375 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 NUMBP49757 651 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 ZNF135P52742 658 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 CLCQ05315 142 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 MAPRE1Q15691 268 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 SLC30A10Q6XR72 485 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 PDIK1LQ8N165 341 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 NDUFAF2Q8N183 169 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 DHX38Q92620 1227 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 SEMA4DQ92854 862 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 MTG1Q9BT17 334 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 NOL11Q9H8H0 719 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 GPN2Q9H9Y4 310 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 NEK6Q9HC98 313 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 ZNF277Q9NRM2 450 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 AASDHPPTQ9NRN7 309 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 TBC1D22BQ9NU19 505 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 XPO7Q9UIA9 1087 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 CDK5RAP2Q96SN8 1893 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 ZNF839A8K0R7 811 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 TISP43B9A030 160 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms