RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 RALAP11233 206 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 SLC9A1P19634 815 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 PON1P27169 355 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 HOXD9P28356 352 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-222ENST00000641587 OXTRP30559 389 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 CHKAP35790 457 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 PBX1P40424 430 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 TRIM14Q14142 442 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 PTPRNQ16849 979 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 TRIM65Q6PJ69 517 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 IL27RAQ6UWB1 636 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 DDI1Q8WTU0 396 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 CPLX3Q8WVH0 158 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 BIRC7Q96CA5 298 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 NT5C1BQ96P26 610 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 CDC6Q99741 560 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 ARID3AQ99856 593 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 MTG2Q9H4K7 406 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 PNPLA8Q9NP80 782 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 CLIC5Q9NZA1 410 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 MARCH2Q9P0N8 246 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 ANKRD6Q9Y2G4 727 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-222ENST00000641587 PCDHGB2Q9Y5G2 931 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 SHROOM3Q8TF72 1996 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 TULP2O00295 520 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 NPC1O15118 1278 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 PMM2O15305 246 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 FSBPO95073 299 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 HLA-FP30511 346 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 SGSHP51688 502 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 AFF3P51826 1226 aaKnown RBP10.43□□□□□ -0.74
PHGDH-222ENST00000641587 ZNF132P52740 706 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 MCCD1P59942 119 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-222ENST00000641587 POLR2FP61218 127 aaKnown RBP10.43□□□□□ -0.74
PHGDH-222ENST00000641587 COG7P83436 770 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 APBA1Q02410 837 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 ARID5AQ03989 594 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 KCNMA1Q12791 1236 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 CAMK2GQ13555 558 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-222ENST00000641587 EIF4HQ15056 248 aaKnown RBP10.43□□□□□ -0.74
PHGDH-222ENST00000641587 FNDC3BQ53EP0 1204 aaKnown RBP10.43□□□□□ -0.74
PHGDH-222ENST00000641587 PRAMEF14Q5SWL7 426 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 BHLHA9Q7RTU4 235 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 TADA2BQ86TJ2 420 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 EHBP1Q8NDI1 1231 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 OR2T3Q8NH03 318 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 PIP4K2CQ8TBX8 421 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 ADAM32Q8TC27 787 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 WFDC5Q8TCV5 224 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 TAF4BQ92750 862 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 SEMA4DQ92854 862 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 IQCDQ96DY2 449 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 ORAI3Q9BRQ5 295 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 DUSP16Q9BY84 665 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 NIF3L1Q9GZT8 377 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 NLRC4Q9NPP4 1024 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 RAB20Q9NX57 234 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 IMPACTQ9P2X3 320 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 DKK4Q9UBT3 224 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 ZNF510Q9Y2H8 683 aa10.43□□□□□ -0.74
PHGDH-222ENST00000641587 KNTC1P50748 2209 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 A0A087WV48 116 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 EIF4E1BA6NMX2 242 aaKnown RBP10.42□□□□□ -0.74
PHGDH-222ENST00000641587 PLK4O00444 970 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 TNFSF14O43557 240 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 SEMA4FO95754 770 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 CYBBP04839 570 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 ITPKBP27987 946 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 DEKP35659 375 aaKnown RBP10.42□□□□□ -0.74
PHGDH-222ENST00000641587 GRK6P43250 576 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 GRIA4P48058 902 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 PSEN1P49768 467 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 CCT8P50990 548 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 GSDMDP57764 484 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 YWHAGP61981 247 aaKnown RBP eCLIP10.42□□□□□ -0.74
PHGDH-222ENST00000641587 RPS14P62263 151 aaKnown RBP10.42□□□□□ -0.74
PHGDH-222ENST00000641587 RAPGEF1Q13905 1077 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 SMAD1Q15797 465 aaKnown RBP10.42□□□□□ -0.74
PHGDH-222ENST00000641587 GJB7Q6PEY0 223 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 CHST9Q7L1S5 443 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 RSRC2Q7L4I2 434 aaKnown RBP10.42□□□□□ -0.74
PHGDH-222ENST00000641587 PIGZQ86VD9 579 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 GATAD2AQ86YP4 633 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 FAM217AQ8IXS0 508 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 PPM1KQ8N3J5 372 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 GALNT15Q8N3T1 639 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 CPXM2Q8N436 756 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 ZNF276Q8N554 614 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 ZNF397Q8NF99 534 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-222ENST00000641587 PDLIM2Q96JY6 352 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 SPAG5Q96R06 1193 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 ULBP1Q9BZM6 244 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 DCLK3Q9C098 648 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 GANQ9H2C0 597 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 TMEM245Q9H330 911 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 CYP3A43Q9HB55 503 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 PLCB1Q9NQ66 1216 aa10.42□□□□□ -0.74
PHGDH-222ENST00000641587 ABCB8Q9NUT2 735 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms