RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 BTN3A2P78410 334 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 NAB1Q13506 487 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 ZIK1Q3SY52 487 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 TBCELQ5QJ74 424 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 GET4Q7L5D6 327 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 MB21D2Q8IYB1 491 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 ZBTB8BQ8NAP8 495 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 ADCY4Q8NFM4 1077 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 THAP2Q9H0W7 228 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 TBC1D24Q9ULP9 559 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 ATP7AQ04656 1500 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 RFX4Q33E94 735 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 EMC1Q8N766 993 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 CBWD1Q9BRT8 395 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 SETD4Q9NVD3 440 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 KLHL28Q9NXS3 571 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 COMMD9Q9P000 198 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 ABL2P42684 1182 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 FXR1P51114 621 aaKnown RBP eCLIP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 ARHGDIBP52566 201 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 EFNA5P52803 228 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 PHTF1Q9UMS5 762 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 JCHAINP01591 159 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 JAK1P23458 1154 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 COPAP53621 1224 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 NUP107P57740 925 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 RPL10AP62906 217 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 SP140Q13342 867 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 SPOCD1Q6ZMY3 1216 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 INTS10Q9NVR2 710 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 MTO1Q9Y2Z2 717 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 CYP4B1P13584 511 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 POLR2EP19388 210 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 PKN2Q16513 984 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 LGMNQ99538 433 aa16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 SMG5Q9UPR3 1016 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-238ENST00000637276 TMEM2Q9UHN6 1383 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 GJA1P17302 382 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 EPHA7Q15375 998 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 LRRC70Q7Z2Q7 622 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 CXorf40AQ8TE69 158 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 TMEM121Q9BTD3 319 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 SIN3BO75182 1162 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 KCNJ5P48544 419 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 COPZ1P61923 177 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 SLC18A3Q16572 532 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 MCEMP1Q8IX19 187 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 EHD3Q9NZN3 535 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 H7C1W4 665 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 PABPC1P11940 636 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 BGNP21810 368 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 ATXN1P54253 815 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 GMFBP60983 142 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 PRAMEF19Q5SWL8 479 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 CRTC3Q6UUV7 619 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 TSHZ1Q6ZSZ6 1077 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 DSN1Q9H410 356 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 USP18Q9UMW8 372 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 METP08581 1390 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 ZW10O43264 779 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 ITIH2P19823 946 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 CBWD6Q4V339 395 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 PDPK2PQ6A1A2 396 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 UBE2R2Q712K3 238 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 RNF145Q96MT1 663 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 EMILIN2Q9BXX0 1053 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 GRID1Q9ULK0 1009 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 GON4LQ3T8J9 2241 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 PZPP20742 1482 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 GDI2P50395 445 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 CHAF1BQ13112 559 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 TSNQ15631 228 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 SLC39A12Q504Y0 691 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 REXO1L1PQ8IX06 675 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 FAM84BQ96KN1 310 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 TOR3AQ9H497 397 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 MCCC2Q9HCC0 563 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 PACSIN3Q9UKS6 424 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 NUP50Q9UKX7 468 aa16.68■□□□□ 0.26
CACNA1A-238ENST00000637276 ISM1B1AKI9 464 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 PGM3O95394 542 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 CYP2A7P20853 494 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 MRNIPQ6NTE8 343 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 PMF1Q6P1K2 205 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 BNC2Q6ZN30 1099 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 ATG14Q6ZNE5 492 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 LRRC34Q8IZ02 419 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 PJA1Q8NG27 643 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 BPIFA3Q9BQP9 254 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 PIGUQ9H490 435 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 RPS6KA6Q9UK32 745 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 RBP3P10745 1247 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 H2AFXP16104 143 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 ITGALP20701 1170 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 GPR15P49685 360 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 NRF1Q16656 503 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 ING5Q8WYH8 240 aa16.67■□□□□ 0.26
CACNA1A-238ENST00000637276 GPR182O15218 404 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms