RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 RPL34P49207 117 aaKnown RBP11.58□□□□□ -0.56
TARDBP-221ENST00000619555 MARSP56192 900 aaKnown RBP11.58□□□□□ -0.56
TARDBP-221ENST00000619555 GCNT1Q02742 428 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 KIF19Q2TAC6 998 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 SYPL2Q5VXT5 272 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 MMS22LQ6ZRQ5 1243 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 SLCO6A1Q86UG4 719 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 MFN1Q8IWA4 741 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 TRIM59Q8IWR1 403 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 CFAP52Q8N1V2 620 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 CARNMT1Q8N4J0 409 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 HJURPQ8NCD3 748 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-221ENST00000619555 FIBINQ8TAL6 211 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 TTC17Q96AE7 1141 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 MYO19Q96H55 970 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 SLC39A13Q96H72 371 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 IRX2Q9BZI1 471 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-221ENST00000619555 INTS2Q9H0H0 1204 aaKnown RBP11.58□□□□□ -0.56
TARDBP-221ENST00000619555 NUCKS1Q9H1E3 243 aaKnown RBP11.58□□□□□ -0.56
TARDBP-221ENST00000619555 PCED1AQ9H1Q7 454 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 ST7Q9NRC1 585 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 TM7SF3Q9NS93 570 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 SUN2Q9UH99 717 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 XPO7Q9UIA9 1087 aaKnown RBP11.58□□□□□ -0.56
TARDBP-221ENST00000619555 PCOLCE2Q9UKZ9 415 aa11.58□□□□□ -0.56
TARDBP-221ENST00000619555 INTS6Q9UL03 887 aaKnown RBP11.58□□□□□ -0.56
TARDBP-221ENST00000619555 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-221ENST00000619555 LAMA5O15230 3695 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 TMEM131Q92545 1883 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 KCNK3O14649 394 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 FSBPO95073 299 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 CER1O95813 267 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 MOCS2O96007 188 aaPredicted RBP11.57□□□□□ -0.56
TARDBP-221ENST00000619555 AFPP02771 609 aaKnown RBP11.57□□□□□ -0.56
TARDBP-221ENST00000619555 DNTTP04053 509 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 KRT5P13647 590 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 CTSOP43234 321 aaPredicted RBP11.57□□□□□ -0.56
TARDBP-221ENST00000619555 ZBTB16Q05516 673 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 KLHL40Q2TBA0 621 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 DCAF6Q58WW2 860 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 FSCBQ5H9T9 825 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 MS4A13Q5J8X5 152 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 IL27RAQ6UWB1 636 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 LAYNQ6UX15 382 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 TAC4Q86UU9 113 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 ADAMTS14Q8WXS8 1223 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 FAM149B1Q96BN6 582 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 BIRC7Q96CA5 298 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 MRGPRX3Q96LB0 322 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 SERPINB11Q96P15 392 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 DDX50Q9BQ39 737 aaKnown RBP11.57□□□□□ -0.56
TARDBP-221ENST00000619555 BTBD1Q9H0C5 482 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 FBRSQ9HAH7 460 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 TM9SF3Q9HD45 589 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 UBE2TQ9NPD8 197 aaPredicted RBP11.57□□□□□ -0.56
TARDBP-221ENST00000619555 ACP6Q9NPH0 428 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 CYTH4Q9UIA0 394 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 CNTN6Q9UQ52 1028 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 TLR6Q9Y2C9 796 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 SNX11Q9Y5W9 270 aa11.57□□□□□ -0.56
TARDBP-221ENST00000619555 PTPRBP23467 1997 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 FREM2Q5SZK8 3169 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 TAF4O00268 1085 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 PAPSS1O43252 624 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 SIN3BO75182 1162 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 LETM1O95202 739 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 ZNF883P0CG24 379 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 ERCC5P28715 1186 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 AFF3P51826 1226 aaKnown RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 ST8SIA6P61647 398 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 TTC31Q49AM3 519 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 HSP90AA4PQ58FG1 418 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 ZC3H12AQ5D1E8 599 aaKnown RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 KCNT1Q5JUK3 1230 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 ZNF776Q68DI1 518 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 GJB7Q6PEY0 223 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 DBX2Q6ZNG2 339 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 GLRX5Q86SX6 157 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 DHX40Q8IX18 779 aaKnown RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 ZNF557Q8N988 423 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 RHBDD1Q8TEB9 315 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 GANCQ8TET4 914 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 ZNF606Q8WXB4 792 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 ORAI3Q9BRQ5 295 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 SLC4A5Q9BY07 1137 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 RSPH9Q9H1X1 276 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 PABPC3Q9H361 631 aaKnown RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 SGK2Q9HBY8 427 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 FBXL12Q9NXK8 326 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 ERVW-1Q9UQF0 538 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 BTBD3Q9Y2F9 522 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 ANKRD6Q9Y2G4 727 aa11.56□□□□□ -0.56
TARDBP-221ENST00000619555 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 URB1O60287 2271 aaKnown RBP11.56□□□□□ -0.56
TARDBP-221ENST00000619555 FASNP49327 2511 aaKnown RBP11.55□□□□□ -0.56
TARDBP-221ENST00000619555 ASXL3Q9C0F0 2248 aa11.55□□□□□ -0.56
TARDBP-221ENST00000619555 TYW5A2RUC4 315 aaKnown RBP11.55□□□□□ -0.56
TARDBP-221ENST00000619555 FAM47DPA6NHR8 397 aa11.55□□□□□ -0.56
TARDBP-221ENST00000619555 TTC34A8MYJ7 566 aa11.55□□□□□ -0.56
TARDBP-221ENST00000619555 E5RJQ4 531 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms