RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 CALN1Q9BXU9 219 aa7.72□□□□□ -1.17
VPS45-213ENST00000618148 FRMD8P1Q9BZ68 369 aaPredicted RBP7.72□□□□□ -1.17
VPS45-213ENST00000618148 TDP1Q9NUW8 608 aa7.72□□□□□ -1.17
VPS45-213ENST00000618148 SMPD4Q9NXE4 827 aa7.72□□□□□ -1.17
VPS45-213ENST00000618148 CLDND1Q9NY35 253 aa7.72□□□□□ -1.17
VPS45-213ENST00000618148 OBP2AQ9NY56 170 aa7.72□□□□□ -1.17
VPS45-213ENST00000618148 SMARCAL1Q9NZC9 954 aa7.72□□□□□ -1.17
VPS45-213ENST00000618148 AGO1Q9UL18 857 aaKnown RBP7.72□□□□□ -1.17
VPS45-213ENST00000618148 ZNF510Q9Y2H8 683 aa7.72□□□□□ -1.17
VPS45-213ENST00000618148 NR2E1Q9Y466 385 aa7.72□□□□□ -1.17
VPS45-213ENST00000618148 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.71□□□□□ -1.18
VPS45-213ENST00000618148 E9PAM4 449 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 CCDC188H7C350 402 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 APOC4-APOC2K7ER74 178 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 LEFTY2O00292 366 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 EEF2KO00418 725 aaKnown RBP7.71□□□□□ -1.18
VPS45-213ENST00000618148 APOC2P02655 101 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 KRT10P13645 584 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 ZFXP17010 805 aaPredicted RBP7.71□□□□□ -1.18
VPS45-213ENST00000618148 TGM2P21980 687 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 FCARP24071 287 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 PAFAH1B1P43034 410 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 NR2C2P49116 596 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 TPI1P60174 286 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 PAFAH1B3Q15102 231 aaKnown RBP7.71□□□□□ -1.18
VPS45-213ENST00000618148 HABP4Q5JVS0 413 aaKnown RBP7.71□□□□□ -1.18
VPS45-213ENST00000618148 ATAT1Q5SQI0 421 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 AFMIDQ63HM1 303 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 FBXL22Q6P050 247 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 C14orf80Q86SX3 495 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 CCDC50Q8IVM0 306 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 CEP112Q8N8E3 955 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 MNS1Q8NEH6 495 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 SH3RF2Q8TEC5 729 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 NKD2Q969F2 451 aaPredicted RBP7.71□□□□□ -1.18
VPS45-213ENST00000618148 TBC1D31Q96DN5 1066 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 CAPZA3Q96KX2 299 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 RIPOR3Q96MK2 946 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 ASB16Q96NS5 453 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 OLFM3Q96PB7 478 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 KLC2Q9H0B6 622 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 LRRC19Q9H756 370 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 CFAP97Q9P2B7 532 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 CDH22Q9UJ99 828 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 CDH7Q9ULB5 785 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 CCL26Q9Y258 94 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 SNX10Q9Y5X0 201 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 ZFP37Q9Y6Q3 630 aaPredicted RBP7.71□□□□□ -1.18
VPS45-213ENST00000618148 DOCK4Q8N1I0 1966 aa7.71□□□□□ -1.18
VPS45-213ENST00000618148 APOL1O14791 398 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 CST8O60676 142 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 MOCS2O96007 188 aaPredicted RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 HMBSP08397 361 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 RHOQP17081 205 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 ERCC2P18074 760 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 TACR2P21452 398 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 IGFBP4P22692 258 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 EPHB2P29323 1055 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 SLC6A4P31645 630 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 CCNG2Q16589 344 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 LONRF2Q1L5Z9 754 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 ODF2Q5BJF6 829 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 FAM78AQ5JUQ0 283 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 MPP7Q5T2T1 576 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 ZFYVE27Q5T4F4 411 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 CCDC181Q5TID7 509 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 TTC39BQ5VTQ0 682 aaPredicted RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 NCBP2-AS2Q69YL0 99 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 CHST9Q7L1S5 443 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 DENND1CQ8IV53 801 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 ARID3BQ8IVW6 561 aaPredicted RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 CELF5Q8N6W0 485 aaKnown RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 RTL3Q8N8U3 475 aaKnown RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 TTC13Q8NBP0 860 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 SLC35B2Q8TB61 432 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 ZSCAN18Q8TBC5 510 aaPredicted RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 ING5Q8WYH8 240 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 SMARCD2Q92925 531 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 SLCO2A1Q92959 643 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 OTUB2Q96DC9 234 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 MYEOVQ96EZ4 313 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 PRICKLE1Q96MT3 831 aaPredicted RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 DDX50Q9BQ39 737 aaKnown RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 HEMGNQ9BXL5 484 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 SLITRK6Q9H5Y7 841 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 HOMER3Q9NSC5 361 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 RBM12Q9NTZ6 932 aaKnown RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 ETNK2Q9NVF9 386 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 TMEM248Q9NWD8 314 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 DONSONQ9NYP3 566 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 CD207Q9UJ71 328 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 LSM7Q9UK45 103 aaKnown RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 R3HDM2Q9Y2K5 976 aaKnown RBP7.7□□□□□ -1.18
VPS45-213ENST00000618148 RAD54BQ9Y620 910 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 GOLGA6L10A0A0M3HER8 536 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 CTAGE15A4D2H0 777 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 F5H5T6 163 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 KRIT1O00522 736 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 CREB3O43889 395 aa7.7□□□□□ -1.18
VPS45-213ENST00000618148 PHF2O75151 1096 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms