RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 RNF34Q969K3 372 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 TTC17Q96AE7 1141 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 PGAP3Q96FM1 320 aaPredicted RBP23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 MYO19Q96H55 970 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 RXFP3Q9NSD7 469 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 CYP8B1Q9UNU6 501 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 CEP250Q9BV73 2442 aa23.08■■□□□ 1.28
GTF2F1-204ENST00000594965 ZBTB24O43167 697 aaPredicted RBP23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 MAP3K13O43283 966 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 PAGE1O75459 146 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 ADCY5O95622 1261 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 DLDP09622 509 aaKnown RBP23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 POLR2EP19388 210 aaKnown RBP23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 MMP8P22894 467 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 PTGER3P43115 390 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 DHPSP49366 369 aaPredicted RBP23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 CXCR3P49682 368 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 CDH18Q13634 790 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 LPCAT2Q7L5N7 544 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 BNIPLQ7Z465 357 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 CIR1Q86X95 450 aaPredicted RBP23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 SLC30A5Q8TAD4 765 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 IGSF8Q969P0 613 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 TBCBQ99426 244 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 VPS45Q9NRW7 570 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 ARHGEF38Q9NXL2 777 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 STAP1Q9ULZ2 295 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 PLA2G4CQ9UP65 541 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 HS3ST4Q9Y661 456 aa23.07■■□□□ 1.28
GTF2F1-204ENST00000594965 PI4KAP42356 2102 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 SYNCRIPO60506 623 aaKnown RBP23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 ZNF217O75362 1048 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 CAVIN2O95810 425 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 ATP5BP06576 529 aaKnown RBP23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 CSKP41240 450 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 IRAK1P51617 712 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 ATXN1P54253 815 aaKnown RBP23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 PTP4A2Q12974 167 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 CAMK2GQ13555 558 aaPredicted RBP23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 AUHQ13825 339 aaKnown RBP23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 PUM1Q14671 1186 aaKnown RBP eCLIP23.06■■□□□ 1.288e-7■■□□□ 13.4
GTF2F1-204ENST00000594965 SLC25A52Q3SY17 297 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 FNDC3BQ53EP0 1204 aaKnown RBP23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 PITRM1Q5JRX3 1037 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 SPDYCQ5MJ68 293 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 TCEAL6Q6IPX3 200 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 KIAA1324Q6UXG2 1013 aaKnown RBP23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 TRIM72Q6ZMU5 477 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 ARMCX6Q7L4S7 300 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 C14orf80Q86SX3 495 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 METTL3Q86U44 580 aaKnown RBP23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 TMPRSS6Q8IU80 811 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 MSANTD4Q8NCY6 345 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 TCEAL3Q969E4 200 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 NAP1L5Q96NT1 182 aaPredicted RBP23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 PRDM16Q9HAZ2 1276 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 ADAMTS9Q9P2N4 1935 aa23.06■■□□□ 1.28
GTF2F1-204ENST00000594965 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 H0Y626 953 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 C7P10643 843 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 GGCXP38435 758 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 CENPCQ03188 943 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 C5orf22Q49AR2 442 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 SLC36A4Q6YBV0 504 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 ARCQ7LC44 396 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 PHLDB2Q86SQ0 1253 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 APCDD1Q8J025 514 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 CCAR2Q8N163 923 aaKnown RBP23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 DEFB119Q8N690 84 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 BAP1Q92560 729 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 MRGPRX3Q96LB0 322 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 C11orf70Q9BRQ4 267 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 TKTL2Q9H0I9 626 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 WDCPQ9H6R7 721 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 ITM2CQ9NQX7 267 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 METTL5Q9NRN9 209 aaKnown RBP23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 KIAA1522Q9P206 1035 aaPredicted RBP23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 USP36Q9P275 1121 aaKnown RBP23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 VANGL2Q9ULK5 521 aa23.05■■□□□ 1.28
GTF2F1-204ENST00000594965 DNAH14Q0VDD8 3507 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 FOXD2O60548 495 aaPredicted RBP23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 CTSOP43234 321 aaPredicted RBP23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 RPL6Q02878 288 aaKnown RBP23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 DEUP1Q05D60 604 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 MTA1Q13330 715 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 CLEC16AQ2KHT3 1053 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 PLEKHG6Q3KR16 790 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 BRMS1LQ5PSV4 323 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 CYP2U1Q7Z449 544 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 EMC1Q8N766 993 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 OR2T3Q8NH03 318 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 NETO1Q8TDF5 533 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 CFAP57Q96MR6 1250 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 PRSS16Q9NQE7 514 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 TMPRSS4Q9NRS4 437 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 TMEM74BQ9NUR3 256 aa23.04■■□□□ 1.28
GTF2F1-204ENST00000594965 GON4LQ3T8J9 2241 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 A0A1B0GTH6 734 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 A0A1B0GVM2 712 aa23.03■■□□□ 1.28
GTF2F1-204ENST00000594965 TCAF2A6NFQ2 919 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 858.1 ms