RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 LRRC31Q6UY01 552 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 PRR23BQ6ZRT6 265 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 ZNF571Q7Z3V5 609 aaPredicted RBP16.96■□□□□ 0.31
DNMT1-229ENST00000593049 ADIPOR2Q86V24 386 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 CFAP52Q8N1V2 620 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 EMC1Q8N766 993 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 MDGA1Q8NFP4 955 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 CPLX3Q8WVH0 158 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 ACOX2Q99424 681 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 ADAM33Q9BZ11 813 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 SIK2Q9H0K1 926 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 ZDHHC4Q9NPG8 344 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 CACNA2D2Q9NY47 1150 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 CALCOCO1Q9P1Z2 691 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 GMEB2Q9UKD1 530 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 HS3ST4Q9Y661 456 aa16.96■□□□□ 0.31
DNMT1-229ENST00000593049 VPS13AQ96RL7 3174 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.95■□□□□ 0.3
DNMT1-229ENST00000593049 A0A1W2PQF6 199 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 RTN2O75298 545 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 CLDN11O75508 207 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 DLDP09622 509 aaKnown RBP16.95■□□□□ 0.3
DNMT1-229ENST00000593049 GPD1P21695 349 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 WASP42768 502 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 ATP11AP98196 1134 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 LMAN2Q12907 356 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 ZNF177Q13360 481 aaPredicted RBP16.95■□□□□ 0.3
DNMT1-229ENST00000593049 CCDC14Q49A88 953 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 C5orf22Q49AR2 442 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 FNDC3BQ53EP0 1204 aaKnown RBP16.95■□□□□ 0.3
DNMT1-229ENST00000593049 E4F1Q66K89 784 aaPredicted RBP16.95■□□□□ 0.3
DNMT1-229ENST00000593049 TMEM215Q68D42 235 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 DCUN1D2Q6PH85 259 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 SERPINA13PQ6UXR4 307 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 PHLDB2Q86SQ0 1253 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 PGBD3Q8N328 593 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 RNF214Q8ND24 703 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 JOSD2Q8TAC2 188 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 WFDC5Q8TCV5 224 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 HMGB4Q8WW32 186 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 CENPIQ92674 756 aaPredicted RBP16.95■□□□□ 0.3
DNMT1-229ENST00000593049 TTC17Q96AE7 1141 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 MYEOVQ96EZ4 313 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 LMLNQ96KR4 655 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 SPACA7Q96KW9 195 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 PARVAQ9NVD7 372 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 NCDNQ9UBB6 729 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 VANGL2Q9ULK5 521 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 ZFHX2Q9C0A1 2572 aaPredicted RBP16.95■□□□□ 0.3
DNMT1-229ENST00000593049 EML5Q05BV3 1969 aa16.95■□□□□ 0.3
DNMT1-229ENST00000593049 TCRBV5S1A1TA0A578 114 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 DDX3XO00571 662 aaKnown RBP eCLIP16.94■□□□□ 0.3
DNMT1-229ENST00000593049 FTLP02792 175 aaPredicted RBP16.94■□□□□ 0.3
DNMT1-229ENST00000593049 GYPCP04921 128 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 MYBL1P10243 752 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 CD70P32970 193 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 RFC1P35251 1148 aaPredicted RBP16.94■□□□□ 0.3
DNMT1-229ENST00000593049 CDH4P55283 916 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 CDO1Q16878 200 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 WDR59Q6PJI9 974 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.94■□□□□ 0.3
DNMT1-229ENST00000593049 CCAR2Q8N163 923 aaKnown RBP16.94■□□□□ 0.3
DNMT1-229ENST00000593049 GPR161Q8N6U8 529 aaKnown RBP16.94■□□□□ 0.3
DNMT1-229ENST00000593049 KDM1BQ8NB78 822 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 OLIG1Q8TAK6 271 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 LOXL4Q96JB6 756 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 ZC3H10Q96K80 434 aaKnown RBP16.94■□□□□ 0.3
DNMT1-229ENST00000593049 HINFPQ9BQA5 517 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 FBRSQ9HAH7 460 aa16.94■□□□□ 0.3
DNMT1-229ENST00000593049 TMCO5BA8MYB1 307 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 ZNF217O75362 1048 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 RHOBTB1O94844 696 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 SKILP12757 684 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 RRM1P23921 792 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 HOXC13P31276 330 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 CSKP41240 450 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 IL12RB1P42701 662 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 ZNF143P52747 638 aaPredicted RBP16.93■□□□□ 0.3
DNMT1-229ENST00000593049 ST8SIA6P61647 398 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 SULT2A1Q06520 285 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 SRSF5Q13243 272 aaKnown RBP16.93■□□□□ 0.3
DNMT1-229ENST00000593049 ELF2Q15723 593 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 TSR1Q2NL82 804 aaKnown RBP16.93■□□□□ 0.3
DNMT1-229ENST00000593049 C15orf59Q2T9L4 293 aaPredicted RBP16.93■□□□□ 0.3
DNMT1-229ENST00000593049 FUT11Q495W5 492 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 PITRM1Q5JRX3 1037 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 PPP1R15BQ5SWA1 713 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 FAM131BQ86XD5 332 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 DRC7Q8IY82 874 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 FAM172AQ8WUF8 416 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 SORCS1Q8WY21 1168 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 IGSF8Q969P0 613 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 MCEEQ96PE7 176 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 CNPY3Q9BT09 278 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 TPSD1Q9BZJ3 242 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 TMEM245Q9H330 911 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 RETREG1Q9H6L5 497 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 TAS2R14Q9NYV8 317 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 SUN2Q9UH99 717 aa16.93■□□□□ 0.3
DNMT1-229ENST00000593049 SCINQ9Y6U3 715 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms