RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 PPWD1Q96BP3 646 aaKnown RBP14□□□□□ -0.17
NDEL1-204ENST00000578172 KCNK13Q9HB14 408 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 POMCP01189 267 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 POLBP06746 335 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 ETFBP38117 255 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 SLC12A1Q13621 1099 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 PARP6Q2NL67 630 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 PPM1LQ5SGD2 360 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 MTHFD1LQ6UB35 978 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 LCLAT1Q6UWP7 414 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 PACS1Q6VY07 963 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 ERO1BQ86YB8 467 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 ANKRD13AQ8IZ07 590 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 PHF21BQ96EK2 531 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 C2CD2Q9Y426 696 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 ZNF711Q9Y462 761 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 TRIP11Q15643 1979 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 ATP6AP2A0A1C7CYW4 349 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 FAM189A1O60320 539 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 ATP6AP2O75787 350 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 ARSAP15289 507 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 ERCC2P18074 760 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 SNX16P57768 344 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 MRPS22P82650 360 aaKnown RBP14□□□□□ -0.17
NDEL1-204ENST00000578172 ART3Q13508 389 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 WASHC2DQ5SRD0 308 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 PIWIL2Q8TC59 973 aaKnown RBP14□□□□□ -0.17
NDEL1-204ENST00000578172 SREK1Q8WXA9 508 aaKnown RBP14□□□□□ -0.17
NDEL1-204ENST00000578172 KHSRPQ92945 711 aaKnown RBP eCLIP14□□□□□ -0.17
NDEL1-204ENST00000578172 ZNF778Q96MU6 729 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 NDNQ99608 321 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 PLEKHA5Q9HAU0 1116 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 APPL1Q9UKG1 709 aa14□□□□□ -0.17
NDEL1-204ENST00000578172 FAF1Q9UNN5 650 aaPredicted RBP14□□□□□ -0.17
NDEL1-204ENST00000578172 FAM72CH0Y354 149 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 MPSTP25325 297 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 TKTP29401 623 aaKnown RBP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 L1CAMP32004 1257 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 NOMO2Q5JPE7 1267 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 FAM72AQ5TYM5 149 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 CES4AQ5XG92 561 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 FAM72DQ6L9T8 149 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 OLFML1Q6UWY5 402 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 TFAP2DQ7Z6R9 452 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 FAM72BQ86X60 149 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 TMPRSS6Q8IU80 811 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 LRRC43Q8N309 656 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 ZNF781Q8N8C0 355 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 GAD1Q99259 594 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 ASB7Q9H672 318 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 GBA2Q9HCG7 927 aaPredicted RBP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 ANLNQ9NQW6 1124 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 LAMA3Q16787 3333 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 CCL15-CCL14A0A0B4J2E2 113 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 VAPBO95292 243 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 MT-CYBP00156 380 aaPredicted RBP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 MX2P20592 715 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 ATP6V1C1P21283 382 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 AFF1P51825 1210 aaKnown RBP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 PLIN5Q00G26 463 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 CCL15Q16663 113 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 PCDH20Q8N6Y1 951 aaKnown RBP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 NMD3Q96D46 503 aaKnown RBP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 CYP3A43Q9HB55 503 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 VANGL2Q9ULK5 521 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 NEMP2A6NFY4 417 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 STX16-NPEPL1H3BU86 382 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 HNRNPLP14866 589 aaKnown RBP eCLIP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 ANPEPP15144 967 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 MAP3K10Q02779 954 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 BST2Q10589 180 aaKnown RBP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 TBL3Q12788 808 aaKnown RBP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 LAMC2Q13753 1193 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 DBN1Q16643 649 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 SNX32Q86XE0 403 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 NIPA2Q8N8Q9 360 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 PABPC5Q96DU9 382 aaKnown RBP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 CNBD2Q96M20 576 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 SEMA6AQ9H2E6 1030 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 SAR1AQ9NR31 198 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 CNTN6Q9UQ52 1028 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 RUVBL2Q9Y230 463 aaKnown RBP13.99□□□□□ -0.17
NDEL1-204ENST00000578172 MCM3APO60318 1980 aa13.99□□□□□ -0.17
NDEL1-204ENST00000578172 RAG1P15918 1043 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 NFKB1P19838 968 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 SKIV2L2P42285 1042 aaKnown RBP13.98□□□□□ -0.17
NDEL1-204ENST00000578172 BCAT1P54687 386 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 ZNF567Q8N184 647 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 MAGEC3Q8TD91 643 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 GPR152Q8TDT2 470 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 SIGLEC10Q96LC7 697 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 PANX3Q96QZ0 392 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 ARHGEF4Q9NR80 690 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 DDX43Q9NXZ2 648 aaKnown RBP13.98□□□□□ -0.17
NDEL1-204ENST00000578172 ITGA11Q9UKX5 1188 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 STAP1Q9ULZ2 295 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 ASB14A6NK59 587 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 TMEM233B4DJY2 109 aa13.98□□□□□ -0.17
NDEL1-204ENST00000578172 ZBTB24O43167 697 aaPredicted RBP13.98□□□□□ -0.17
NDEL1-204ENST00000578172 LMNAP02545 664 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 404.9 ms