RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SEPT7Q16181 437 aaKnown RBP18.63■□□□□ 0.57
SMPD3-211ENST00000568373 SPRED3Q2MJR0 410 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 STEAP4Q687X5 459 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 CGB2Q6NT52 195 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 TRMT10BQ6PF06 316 aaKnown RBP18.63■□□□□ 0.57
SMPD3-211ENST00000568373 SH2D5Q6ZV89 423 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 CYS1Q717R9 158 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 DCP1BQ8IZD4 617 aaKnown RBP18.63■□□□□ 0.57
SMPD3-211ENST00000568373 SMOC2Q9H3U7 446 aa18.63■□□□□ 0.57
SMPD3-211ENST00000568373 ACTR5Q9H9F9 607 aaPredicted RBP18.63■□□□□ 0.57
SMPD3-211ENST00000568373 ABI2Q9NYB9 513 aaPredicted RBP18.63■□□□□ 0.57
SMPD3-211ENST00000568373 TTC3P53804 2025 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 KRT37O76014 449 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 GARSP41250 739 aaKnown RBP18.62■□□□□ 0.57
SMPD3-211ENST00000568373 DNAJC3Q13217 504 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 BRMS1LQ5PSV4 323 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 LGSNQ5TDP6 509 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 SCN4BQ8IWT1 228 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 LRRC8CQ8TDW0 803 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 MOCS1Q9NZB8 636 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 PHF24Q9UPV7 400 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 WDR27A2RRH5 827 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 LPXNO60711 386 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 SNRPAP09012 282 aaKnown RBP18.62■□□□□ 0.57
SMPD3-211ENST00000568373 CSH1P0DML2 217 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 CSH2P0DML3 217 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 ADRA1DP25100 572 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 PGFP49763 221 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 ACTN3Q08043 901 aaPredicted RBP18.62■□□□□ 0.57
SMPD3-211ENST00000568373 CASC4Q6P4E1 433 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 FAM47EQ6ZV65 393 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 TRPM8Q7Z2W7 1104 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 SCD5Q86SK9 330 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 MICALL1Q8N3F8 863 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 SPOCK2Q92563 424 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 FUBP3Q96I24 572 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMPD3-211ENST00000568373 APOPT1Q96IL0 206 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 HAPLN3Q96S86 360 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 PRKAG3Q9UGI9 489 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 ARL2BPQ9Y2Y0 163 aa18.62■□□□□ 0.57
SMPD3-211ENST00000568373 MYO16Q9Y6X6 1858 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 TRIM49D1C9J1S8 452 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 DNM1LO00429 736 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 SYN3O14994 580 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 TADA2AO75478 443 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 ALDH1A2O94788 518 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 PYGBP11216 843 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 SESN2P58004 480 aaPredicted RBP18.61■□□□□ 0.57
SMPD3-211ENST00000568373 NFE2Q16621 373 aaPredicted RBP18.61■□□□□ 0.57
SMPD3-211ENST00000568373 CCNJLQ8IV13 435 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 APBB2Q92870 758 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 PLCD4Q9BRC7 762 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 SLC17A7Q9P2U7 560 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 NEU3Q9UQ49 428 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 UGT1A9O60656 530 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 MGAT1P26572 445 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 CCR1P32246 355 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 NEK3P51956 506 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 CRADDP78560 199 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 VARS2Q5ST30 1063 aaKnown RBP18.61■□□□□ 0.57
SMPD3-211ENST00000568373 DEPDC1BQ8WUY9 529 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 ARNTL2Q8WYA1 636 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 CASP10Q92851 521 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 OXNAD1Q96HP4 312 aaPredicted RBP18.61■□□□□ 0.57
SMPD3-211ENST00000568373 GORASP1Q9BQQ3 440 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 NAT9Q9BTE0 207 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 ELAC1Q9H777 363 aaKnown RBP18.61■□□□□ 0.57
SMPD3-211ENST00000568373 UGT1A7Q9HAW7 530 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 UGT1A10Q9HAW8 530 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 UGT1A8Q9HAW9 530 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 NMUR1Q9HB89 426 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 PIH1D1Q9NWS0 290 aaKnown RBP18.61■□□□□ 0.57
SMPD3-211ENST00000568373 SFMBT1Q9UHJ3 866 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 TRHDEQ9UKU6 1024 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 PHTF1Q9UMS5 762 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 STARD13Q9Y3M8 1113 aa18.61■□□□□ 0.57
SMPD3-211ENST00000568373 SHROOM3Q8TF72 1996 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 VWA8A3KMH1 1905 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 NBNO60934 754 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 KRT38O76015 456 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 ALADP13716 330 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 PGAM1P18669 254 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 GRK4P32298 578 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 RWDD4Q6NW29 188 aaKnown RBP18.6■□□□□ 0.57
SMPD3-211ENST00000568373 ABI1Q8IZP0 508 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 MTBPQ96DY7 904 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 VAT1Q99536 393 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 SIK2Q9H0K1 926 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 GBA3Q9H227 469 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 VPS11Q9H270 941 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 SLCO1B3Q9NPD5 702 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 CAPN7Q9Y6W3 813 aa18.6■□□□□ 0.57
SMPD3-211ENST00000568373 A0A1W2PQH9 124 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ZBTB24O43167 697 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-211ENST00000568373 MSI1O43347 362 aaKnown RBP18.59■□□□□ 0.57
SMPD3-211ENST00000568373 PAGE1O75459 146 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 AP2A1O95782 977 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 SRGAP2BP0DMP2 458 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 CDK7P50613 346 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ZBTB17Q13105 803 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms