RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 LZTS1Q9Y250 596 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 ASB3Q9Y575 518 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 GREB1Q4ZG55 1949 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 WASH4PA8MWX3 477 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 HMGB1P1B2RPK0 211 aaPredicted RBP14.18□□□□□ -0.14
TPM1-215ENST00000558868 E9PAM4 449 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 ALOX15BO15296 676 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 TLL1O43897 1013 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 LILRB3O75022 631 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 MAP3K6O95382 1288 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 MOCS2O96007 188 aaPredicted RBP14.18□□□□□ -0.14
TPM1-215ENST00000558868 IGLV3-27P01718 113 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 ABHD2P08910 425 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 TSHRP16473 764 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 ATP2A2P16615 1042 aaKnown RBP14.18□□□□□ -0.14
TPM1-215ENST00000558868 DNAJB2P25686 324 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 CDK16Q00536 496 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 PPIDQ08752 370 aaKnown RBP14.18□□□□□ -0.14
TPM1-215ENST00000558868 ZNF844Q08AG5 666 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 GALNT2Q10471 571 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 CBLBQ13191 982 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 KCNJ11Q14654 390 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 KRT71Q3SY84 523 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 C6orf118Q5T5N4 469 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 AGBL2Q5U5Z8 902 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 HDAC11Q96DB2 347 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 P2RY11Q96G91 374 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 VAT1Q99536 393 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 EMILIN2Q9BXX0 1053 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 STMN4Q9H169 189 aaPredicted RBP14.18□□□□□ -0.14
TPM1-215ENST00000558868 EPB41L4BQ9H329 900 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 RETREG1Q9H6L5 497 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 TMBIM4Q9HC24 238 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 NINJ2Q9NZG7 142 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 PPARGC1AQ9UBK2 798 aaKnown RBP14.18□□□□□ -0.14
TPM1-215ENST00000558868 TRHDEQ9UKU6 1024 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 MFHAS1Q9Y4C4 1052 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 SNX10Q9Y5X0 201 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 HS3ST4Q9Y661 456 aa14.18□□□□□ -0.14
TPM1-215ENST00000558868 ZNF638Q14966 1978 aaKnown RBP14.18□□□□□ -0.14
TPM1-215ENST00000558868 GOLGA6CA6NDK9 693 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 ZNF840PA6NDX5 716 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 E7EVH7 732 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 RNF103O00237 685 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 POLR3GO15318 223 aaPredicted RBP14.17□□□□□ -0.14
TPM1-215ENST00000558868 TEX28O15482 410 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 CXCL14O95715 111 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 ADH1AP07327 375 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 IVLP07476 585 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 GOLGA6DP0CG33 693 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 RHOQP17081 205 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 HMGA1P17096 107 aaKnown RBP14.17□□□□□ -0.14
TPM1-215ENST00000558868 TPSB2P20231 275 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 CA8P35219 290 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 GARSP41250 739 aaKnown RBP14.17□□□□□ -0.14
TPM1-215ENST00000558868 TWF1Q12792 350 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 TPSAB1Q15661 275 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 PABPC1LQ4VXU2 614 aaKnown RBP14.17□□□□□ -0.14
TPM1-215ENST00000558868 DNAJC21Q5F1R6 531 aaKnown RBP14.17□□□□□ -0.14
TPM1-215ENST00000558868 ANKRD20A2Q5SQ80 823 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 ANKRD20A1Q5TYW2 823 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 ANKRD20A3Q5VUR7 823 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 CCDC149Q6ZUS6 474 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 B4GALNT4Q76KP1 1039 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 MIB1Q86YT6 1006 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 KLHL23Q8NBE8 558 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 MCUQ8NE86 351 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 CCDC110Q8TBZ0 833 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 PLD4Q96BZ4 506 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 ATP6V1G3Q96LB4 118 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 LGMNQ99538 433 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 PRDM6Q9NQX0 595 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 GOLGA6AQ9NYA3 693 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 VPS18Q9P253 973 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 INSL5Q9Y5Q6 135 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 PTPRSQ13332 1948 aa14.17□□□□□ -0.14
TPM1-215ENST00000558868 KIAA1671Q9BY89 1806 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 A0A087WUV0 522 aaPredicted RBP14.16□□□□□ -0.14
TPM1-215ENST00000558868 E7ESA3 106 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 LPXNO60711 386 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 TBX18O95935 607 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 LINC00271P0C7V0 271 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 VAV1P15498 845 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 COL9A1P20849 921 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 PHBP35232 272 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 BMPR1AP36894 532 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 LMAN1P49257 510 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 SLC11A2P49281 568 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 HARS2P49590 506 aaKnown RBP14.16□□□□□ -0.14
TPM1-215ENST00000558868 UBE3AQ05086 875 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 PDIA2Q13087 525 aaKnown RBP14.16□□□□□ -0.14
TPM1-215ENST00000558868 SEMA5AQ13591 1074 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 STAT4Q14765 748 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 KYNUQ16719 465 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 PARP6Q2NL67 630 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 MS4A13Q5J8X5 152 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 ANKRD22Q5VYY1 191 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 ITPRIPL1Q6GPH6 555 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 RTL10Q7L3V2 364 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms