RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 RNF8O76064 485 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 VAV1P15498 845 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 GALNT2Q10471 571 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 IHHQ14623 411 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 NOMO1Q15155 1222 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 NPNTQ6UXI9 565 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 CHST9Q7L1S5 443 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 C12orf40Q86WS4 652 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 UMODL1-AS1Q8N2C9 162 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.97□□□□□ -1.29
LINC00517-202ENST00000554257 HSPH1Q92598 858 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 SMARCD2Q92925 531 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 TADA1Q96BN2 335 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 RBM41Q96IZ5 413 aaKnown RBP6.97□□□□□ -1.29
LINC00517-202ENST00000554257 NSMCE3Q96MG7 304 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 APOL5Q9BWW9 433 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 OSBPL8Q9BZF1 889 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 DCLK3Q9C098 648 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 PRDM16Q9HAZ2 1276 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 PRDM6Q9NQX0 595 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 LRP4O75096 1905 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 C2CD4DB7Z1M9 353 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 CAPN9O14815 690 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 CACNG3O60359 315 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 ZMPSTE24O75844 475 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 KRT1P04264 644 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 SLC2A3P11169 496 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 MBL2P11226 248 aaPredicted RBP6.97□□□□□ -1.29
LINC00517-202ENST00000554257 MSNP26038 577 aaKnown RBP6.97□□□□□ -1.29
LINC00517-202ENST00000554257 VIPR2P41587 438 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 MTHFRP42898 656 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 COG7P83436 770 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 MESP2Q0VG99 397 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 MTA1Q13330 715 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 FSCBQ5H9T9 825 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 MPP7Q5T2T1 576 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 DENND1CQ8IV53 801 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 UNC45BQ8IWX7 931 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 RTL3Q8N8U3 475 aaKnown RBP6.97□□□□□ -1.29
LINC00517-202ENST00000554257 OSCP1Q8WVF1 389 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 MRPS31Q92665 395 aaKnown RBP6.97□□□□□ -1.29
LINC00517-202ENST00000554257 EZH1Q92800 747 aaPredicted RBP6.97□□□□□ -1.29
LINC00517-202ENST00000554257 RNF25Q96BH1 459 aaPredicted RBP6.97□□□□□ -1.29
LINC00517-202ENST00000554257 ACE2Q9BYF1 805 aaPredicted RBP6.97□□□□□ -1.29
LINC00517-202ENST00000554257 CFAP97Q9P2B7 532 aa6.97□□□□□ -1.29
LINC00517-202ENST00000554257 CXorf51AA0A1B0GTR3 108 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 HOXC11O43248 304 aaPredicted RBP6.96□□□□□ -1.29
LINC00517-202ENST00000554257 LIASO43766 372 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 ZNF821O75541 412 aaPredicted RBP6.96□□□□□ -1.29
LINC00517-202ENST00000554257 CDH6P55285 790 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 GBE1Q04446 702 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 RAP1GAP2Q684P5 730 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 RFWD3Q6PCD5 774 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 RHBDF2Q6PJF5 856 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 CIR1Q86X95 450 aaPredicted RBP6.96□□□□□ -1.29
LINC00517-202ENST00000554257 CELF5Q8N6W0 485 aaKnown RBP6.96□□□□□ -1.29
LINC00517-202ENST00000554257 UBL4BQ8N7F7 174 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 ATP6V0D2Q8N8Y2 350 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 GOLGA1Q92805 767 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 NKD2Q969F2 451 aaPredicted RBP6.96□□□□□ -1.29
LINC00517-202ENST00000554257 MYO19Q96H55 970 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 LINC00597Q9H2U6 94 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 RBM12Q9NTZ6 932 aaKnown RBP6.96□□□□□ -1.29
LINC00517-202ENST00000554257 MRPS23Q9Y3D9 190 aaKnown RBP6.96□□□□□ -1.29
LINC00517-202ENST00000554257 MYO9BQ13459 2157 aa6.96□□□□□ -1.29
LINC00517-202ENST00000554257 A0A0A0MRY4 1105 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 APOC4-APOC2K7ER74 178 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 APOC2P02655 101 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 CYP17A1P05093 508 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 ERCC2P18074 760 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 TGM2P21980 687 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 AMPD1P23109 780 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 IVDP26440 423 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 PLK1P53350 603 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 HADHQ16836 314 aaKnown RBP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 WHAMMP3Q1A5X7 153 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 TMEM215Q68D42 235 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 ARHGAP36Q6ZRI8 547 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 GET4Q7L5D6 327 aaPredicted RBP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 DDX42Q86XP3 938 aaKnown RBP eCLIP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 MFSD6LQ8IWD5 586 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 GLIS1Q8NBF1 620 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 MAML1Q92585 1016 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 PPP2R3CQ969Q6 453 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 NECTIN4Q96NY8 510 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 QKIQ96PU8 341 aaKnown RBP eCLIP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 GAS2L1Q99501 681 aaPredicted RBP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 DHX35Q9H5Z1 703 aaKnown RBP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 TRPC7Q9HCX4 862 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 TRPV5Q9NQA5 729 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 SAE1Q9UBE0 346 aaPredicted RBP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 PCYOX1Q9UHG3 505 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 INTS6Q9UL03 887 aaKnown RBP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 ZNF510Q9Y2H8 683 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 SYNJ2BP-COX16A0A087WUM0 186 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 FGF10O15520 208 aaPredicted RBP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 MAFKO60675 156 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 ZRANB2O95218 330 aaKnown RBP eCLIP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 HMBSP08397 361 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 SRGAP2BP0DMP2 458 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms