RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 DIS3L2Q8IYB7 885 aaKnown RBP8.08□□□□□ -1.12
NUP54-215ENST00000514313 LAS2Q8IYD9 372 aa8.08□□□□□ -1.12
NUP54-215ENST00000514313 LINC01465Q8N7H1 131 aa8.08□□□□□ -1.12
NUP54-215ENST00000514313 RFWD2Q8NHY2 731 aa8.08□□□□□ -1.12
NUP54-215ENST00000514313 DVL3Q92997 716 aaPredicted RBP8.08□□□□□ -1.12
NUP54-215ENST00000514313 KAZALD1Q96I82 304 aa8.08□□□□□ -1.12
NUP54-215ENST00000514313 MMS19Q96T76 1030 aa8.08□□□□□ -1.12
NUP54-215ENST00000514313 SDF4Q9BRK5 362 aa8.08□□□□□ -1.12
NUP54-215ENST00000514313 CENPOQ9BU64 300 aa8.08□□□□□ -1.12
NUP54-215ENST00000514313 RNF26Q9BY78 433 aaPredicted RBP8.08□□□□□ -1.12
NUP54-215ENST00000514313 SEMA4BQ9NPR2 832 aaPredicted RBP8.08□□□□□ -1.12
NUP54-215ENST00000514313 SLC25A10Q9UBX3 287 aaPredicted RBP8.08□□□□□ -1.12
NUP54-215ENST00000514313 KLQ9UEF7 1012 aa8.08□□□□□ -1.12
NUP54-215ENST00000514313 CNOT11Q9UKZ1 510 aaKnown RBP8.08□□□□□ -1.12
NUP54-215ENST00000514313 GPR34Q9UPC5 381 aa8.08□□□□□ -1.12
NUP54-215ENST00000514313 B3GNT3Q9Y2A9 372 aa8.08□□□□□ -1.12
NUP54-215ENST00000514313 QSOX1O00391 747 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 TSPAN4O14817 238 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 DOK2O60496 412 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 METTL18O95568 372 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 TTLL1O95922 423 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 APEHP13798 732 aaKnown RBP8.07□□□□□ -1.12
NUP54-215ENST00000514313 RGS2P41220 211 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 STAT1P42224 750 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 STAT6P42226 847 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 GPD2P43304 727 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 MVDP53602 400 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 SLC37A1P57057 533 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 EEFSECP57772 596 aaKnown RBP8.07□□□□□ -1.12
NUP54-215ENST00000514313 WDR5P61964 334 aaKnown RBP8.07□□□□□ -1.12
NUP54-215ENST00000514313 DGCR2P98153 550 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 SETQ01105 290 aaPredicted RBP8.07□□□□□ -1.12
NUP54-215ENST00000514313 GOLGA8FQ08AF8 430 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 TBC1D25Q3MII6 688 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 ATF7IPQ6VMQ6 1270 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 SCN4BQ8IWT1 228 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 ERP27Q96DN0 273 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 C20orf173Q96LM9 149 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 EYA3Q99504 573 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 MPHOSPH8Q99549 860 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 BEX4Q9NWD9 120 aaPredicted RBP8.07□□□□□ -1.12
NUP54-215ENST00000514313 POLG2Q9UHN1 485 aa8.07□□□□□ -1.12
NUP54-215ENST00000514313 FYB1O15117 783 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 CLEC3BP05452 202 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 COPB1P53618 953 aaKnown RBP8.06□□□□□ -1.12
NUP54-215ENST00000514313 CLNS1AP54105 237 aaKnown RBP8.06□□□□□ -1.12
NUP54-215ENST00000514313 CDH15P55291 814 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 SHC2P98077 582 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 CFHR3Q02985 330 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 PTP4A2Q12974 167 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 NAA25Q14CX7 972 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 SH2D4BQ5SQS7 431 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 LY6G5CQ5SRR4 150 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 INO80CQ6PI98 192 aaPredicted RBP8.06□□□□□ -1.12
NUP54-215ENST00000514313 BRINP3Q76B58 766 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 CPLX4Q7Z7G2 160 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 MON1AQ86VX9 555 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 ADGRF3Q8IZF5 1079 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 NGEFQ8N5V2 710 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 ENDOVQ8N8Q3 282 aaKnown RBP8.06□□□□□ -1.12
NUP54-215ENST00000514313 SRFBP1Q8NEF9 429 aaKnown RBP8.06□□□□□ -1.12
NUP54-215ENST00000514313 MAFAQ8NHW3 353 aaPredicted RBP8.06□□□□□ -1.12
NUP54-215ENST00000514313 ZCCHC10Q8TBK6 192 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 METTL6Q8TCB7 284 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 CREB3L4Q8TEY5 395 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 RSRC1Q96IZ7 334 aaKnown RBP8.06□□□□□ -1.12
NUP54-215ENST00000514313 TIGD1Q96MW7 591 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 CD180Q99467 661 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 PDCL3Q9H2J4 239 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 BRF2Q9HAW0 419 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 VEZTQ9HBM0 779 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 TAS2R10Q9NYW0 307 aa8.06□□□□□ -1.12
NUP54-215ENST00000514313 MAST3O60307 1309 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 KRTAP9-6A0A140TA67 174 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 PRYO14603 147 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 SYN3O14994 580 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 SCGB1D1O95968 90 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 SLC3A2P08195 630 aaKnown RBP8.05□□□□□ -1.12
NUP54-215ENST00000514313 ELFN1P0C7U0 828 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 MAPK4P31152 587 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 GRIA3P42263 894 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 BLOC1S1P78537 153 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 ARHGAP8P85298 464 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 ALKBH1Q13686 389 aaKnown RBP8.05□□□□□ -1.12
NUP54-215ENST00000514313 GXYLT1Q4G148 440 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 ZNF766Q5HY98 468 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 VPS52Q8N1B4 723 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 ZNF366Q8N895 744 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 GPR78Q96P69 363 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 LBHD1Q9BQE6 289 aaPredicted RBP8.05□□□□□ -1.12
NUP54-215ENST00000514313 CLSTN3Q9BQT9 956 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 CIPCQ9C0C6 399 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 LMAN2LQ9H0V9 348 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 TBC1D14Q9P2M4 693 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 SARDHQ9UL12 918 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 TSC22D4Q9Y3Q8 395 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 PIAS3Q9Y6X2 628 aa8.05□□□□□ -1.12
NUP54-215ENST00000514313 TNFSF14O43557 240 aa8.04□□□□□ -1.12
NUP54-215ENST00000514313 PTP4A3O75365 173 aa8.04□□□□□ -1.12
NUP54-215ENST00000514313 TIPRLO75663 272 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms