RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CIR1Q86X95 450 aaPredicted RBP13.98□□□□□ -0.17
COL1A1-208ENST00000494334 CCAR2Q8N163 923 aaKnown RBP13.98□□□□□ -0.17
COL1A1-208ENST00000494334 ZNF557Q8N988 423 aaPredicted RBP13.98□□□□□ -0.17
COL1A1-208ENST00000494334 IL17RCQ8NAC3 791 aa13.98□□□□□ -0.17
COL1A1-208ENST00000494334 SPC24Q8NBT2 197 aa13.98□□□□□ -0.17
COL1A1-208ENST00000494334 KCNV2Q8TDN2 545 aa13.98□□□□□ -0.17
COL1A1-208ENST00000494334 NUP85Q9BW27 656 aa13.98□□□□□ -0.17
COL1A1-208ENST00000494334 OSBPL2Q9H1P3 480 aa13.98□□□□□ -0.17
COL1A1-208ENST00000494334 PRMT8Q9NR22 394 aaPredicted RBP13.98□□□□□ -0.17
COL1A1-208ENST00000494334 IMPACTQ9P2X3 320 aa13.98□□□□□ -0.17
COL1A1-208ENST00000494334 GGA2Q9UJY4 613 aa13.98□□□□□ -0.17
COL1A1-208ENST00000494334 IGLV3-10A0A075B6K4 115 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 A0A1B0GVM2 712 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 TCAF2A6NFQ2 919 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 E9PAM4 449 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 H0Y626 953 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 H0Y858 1186 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 SRGAP2O75044 1071 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 CNTN5O94779 1100 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 PAPSS2O95340 614 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-208ENST00000494334 KLF8O95600 359 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-208ENST00000494334 TMEM253P0C7T8 217 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 PABPC1P11940 636 aaKnown RBP13.97□□□□□ -0.17
COL1A1-208ENST00000494334 FECHP22830 423 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 HOXC13P31276 330 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 CSTF1Q05048 431 aaKnown RBP13.97□□□□□ -0.17
COL1A1-208ENST00000494334 SCAPQ12770 1279 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 LMAN2Q12907 356 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 CDH18Q13634 790 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 ALFQ53S48 1182 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 EGFLAMQ63HQ2 1017 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 TSSK4Q6SA08 328 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 LRRC31Q6UY01 552 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 CHST9Q7L1S5 443 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 SYT13Q7L8C5 426 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 SLFN11Q7Z7L1 901 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 ADIPOR2Q86V24 386 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 CCDC117Q8IWD4 279 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-208ENST00000494334 CCDC170Q8IYT3 715 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 CCDC33Q8N5R6 958 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 ALLCQ8N6M5 410 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 ZNF513Q8N8E2 541 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-208ENST00000494334 TXNDC5Q8NBS9 432 aaKnown RBP13.97□□□□□ -0.17
COL1A1-208ENST00000494334 CTNNBL1Q8WYA6 563 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-208ENST00000494334 BTBD6Q96KE9 485 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 ELOVL2Q9NXB9 296 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 OR12D3Q9UGF7 316 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 FBXO4Q9UKT5 387 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 FZD10Q9ULW2 581 aa13.97□□□□□ -0.17
COL1A1-208ENST00000494334 FAM72CH0Y354 149 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 K7ESF4 209 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 SGK1O00141 431 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 TIMM44O43615 452 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 ADAM23O75077 832 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 LRCH4O75427 683 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 CLDN11O75508 207 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 RNF8O76064 485 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 TDGF1P13385 188 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 HNRNPLP14866 589 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL1A1-208ENST00000494334 CDH4P55283 916 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 NRG1Q02297 640 aaPredicted RBP13.96□□□□□ -0.17
COL1A1-208ENST00000494334 DMC1Q14565 340 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 ACAP1Q15027 740 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 EIF4HQ15056 248 aaKnown RBP13.96□□□□□ -0.17
COL1A1-208ENST00000494334 HSF5Q4G112 596 aaPredicted RBP13.96□□□□□ -0.17
COL1A1-208ENST00000494334 FAM72AQ5TYM5 149 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 MANEALQ5VSG8 457 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 FAM72DQ6L9T8 149 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 FAM72BQ86X60 149 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 TMTC1Q8IUR5 882 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 AHI1Q8N157 1196 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 PYROXD2Q8N2H3 581 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 ZNF564Q8TBZ8 553 aaPredicted RBP13.96□□□□□ -0.17
COL1A1-208ENST00000494334 WFIKKN2Q8TEU8 576 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 UCMAQ8WVF2 138 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 ACDQ96AP0 544 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 ACOX2Q99424 681 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 CIPCQ9C0C6 399 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 MPP6Q9NZW5 540 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 KIAA1522Q9P206 1035 aaPredicted RBP13.96□□□□□ -0.17
COL1A1-208ENST00000494334 CTTNBP2NLQ9P2B4 639 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 UVRAGQ9P2Y5 699 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 PCSK1NQ9UHG2 260 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 ANAPC7Q9UJX3 599 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 INTS6Q9UL03 887 aaKnown RBP13.96□□□□□ -0.17
COL1A1-208ENST00000494334 MMP17Q9ULZ9 603 aa13.96□□□□□ -0.17
COL1A1-208ENST00000494334 KIAA1549LQ6ZVL6 1849 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-208ENST00000494334 SOWAHDA6NJG2 315 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 MYO1FO00160 1098 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 LRIG2O94898 1065 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 LCA5LO95447 670 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 SP9P0CG40 484 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 MIPP30301 263 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 PCK1P35558 622 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 CYLC1P35663 651 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-208ENST00000494334 PTPN5P54829 565 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 AIF1P55008 147 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 ZNF177Q13360 481 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-208ENST00000494334 PIGHQ14442 188 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms