RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RPP40O75818 363 aaKnown RBP13.33□□□□□ -0.28
COL5A1-206ENST00000465877 F9P00740 461 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 KRT3P12035 628 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 TNFAIP3P21580 790 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 PTPN9P43378 593 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 IRAK1P51617 712 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 ZBED6P86452 979 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 ATP11AP98196 1134 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 AUHQ13825 339 aaKnown RBP13.33□□□□□ -0.28
COL5A1-206ENST00000465877 ZNF234Q14588 700 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 C15orf59Q2T9L4 293 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-206ENST00000465877 HGSNATQ68CP4 663 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 SDE2Q6IQ49 451 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 ACAD10Q6JQN1 1059 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 KIAA0907Q7Z7F0 614 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-206ENST00000465877 ADIPOR2Q86V24 386 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 FAM131BQ86XD5 332 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 CCDC117Q8IWD4 279 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-206ENST00000465877 MCOLN2Q8IZK6 566 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 CCAR2Q8N163 923 aaKnown RBP13.33□□□□□ -0.28
COL5A1-206ENST00000465877 FIBINQ8TAL6 211 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 HMGB4Q8WW32 186 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 RXFP2Q8WXD0 754 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 SORCS1Q8WY21 1168 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 RPRD1AQ96P16 312 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-206ENST00000465877 MCEEQ96PE7 176 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 WDCPQ9H6R7 721 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 CD248Q9HCU0 757 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 BCCIPQ9P287 314 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL5A1-206ENST00000465877 THAP10Q9P2Z0 257 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-206ENST00000465877 CAPN11Q9UMQ6 739 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 STON1Q9Y6Q2 735 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 DNAH14Q0VDD8 3507 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 HRO43593 1189 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 SKILP12757 684 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 PDGFRAP16234 1089 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 GPD1P21695 349 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 RRM1P23921 792 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 PRKCHP24723 683 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 RFC1P35251 1148 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-206ENST00000465877 ENPP2Q13822 863 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 SIM2Q14190 667 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-206ENST00000465877 STARD3Q14849 445 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 E2F5Q15329 346 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 LPAL2Q16609 132 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 CCDC14Q49A88 953 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 FSCBQ5H9T9 825 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 PPP1R15BQ5SWA1 713 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 MBLAC2Q68D91 279 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 KIAA1211LQ6NV74 962 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 FBXL22Q6P050 247 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 SERPINA13PQ6UXR4 307 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 CEP68Q76N32 757 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 STRADAQ7RTN6 431 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-206ENST00000465877 FAM172AQ8WUF8 416 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 CYB5D2Q8WUJ1 264 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 SYN2Q92777 582 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-206ENST00000465877 IGSF8Q969P0 613 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 ERLEC1Q96DZ1 483 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 LMLNQ96KR4 655 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 SIK2Q9H0K1 926 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 TMPRSS4Q9NRS4 437 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 TMEM51Q9NW97 253 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 RAB23Q9ULC3 237 aa13.32□□□□□ -0.28
COL5A1-206ENST00000465877 TP53BP1Q12888 1972 aaPredicted RBP13.31□□□□□ -0.28
COL5A1-206ENST00000465877 SIGLEC16A6NMB1 481 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 WASH3PC4AMC7 463 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 H0Y626 953 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 DDX3XO00571 662 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL5A1-206ENST00000465877 CCP110O43303 1012 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 ENDOD1O94919 500 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 GABRG2P18507 467 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 POLR2EP19388 210 aaKnown RBP13.31□□□□□ -0.28
COL5A1-206ENST00000465877 NDUFV2P19404 249 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 CASP14P31944 242 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 CSKP41240 450 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 TRIM14Q14142 442 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 PTPRNQ16849 979 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 C5orf22Q49AR2 442 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 FNDC3BQ53EP0 1204 aaKnown RBP13.31□□□□□ -0.28
COL5A1-206ENST00000465877 RAB6CQ53S08 254 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 PITRM1Q5JRX3 1037 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 SH3PXD2AQ5TCZ1 1133 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 SPECC1LQ69YQ0 1117 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 LAIR1Q6GTX8 287 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 CXorf57Q6NSI4 855 aaKnown RBP13.31□□□□□ -0.28
COL5A1-206ENST00000465877 WDR59Q6PJI9 974 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 C14orf80Q86SX3 495 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 DNAAF5Q86Y56 855 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 CPLX3Q8WVH0 158 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 VCPIP1Q96JH7 1222 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 HINFPQ9BQA5 517 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 RAB6CQ9H0N0 254 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 NCDNQ9UBB6 729 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 INTS6Q9UL03 887 aaKnown RBP13.31□□□□□ -0.28
COL5A1-206ENST00000465877 LUC7L2Q9Y383 392 aaKnown RBP13.31□□□□□ -0.28
COL5A1-206ENST00000465877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL5A1-206ENST00000465877 SNX10Q9Y5X0 201 aa13.31□□□□□ -0.28
COL5A1-206ENST00000465877 EP300Q09472 2414 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms