RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, human

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-210	ENST00000457373	HJURP	Q8NCD3	748 aa	Predicted RBP	10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	CCDC26	Q8TAB7	109 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	ZNF653	Q96CK0	615 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	ANP32E	Q9BTT0	268 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	SLC2A11	Q9BYW1	496 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	IRF2BPL	Q9H1B7	796 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	SCUBE2	Q9NQ36	999 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	ANLN	Q9NQW6	1124 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	ABHD10	Q9NUJ1	306 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	ARHGEF38	Q9NXL2	777 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	FBXO4	Q9UKT5	387 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	PAXBP1	Q9Y5B6	917 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	SNX10	Q9Y5X0	201 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	HS3ST4	Q9Y661	456 aa		10.43	□□□□□ -0.74
RFX3-210	ENST00000457373	CACNA1I	Q9P0X4	2223 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	MYO18A	Q92614	2054 aa	Known RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373		A0A087X0T9	212 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373		H0Y626	953 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	CCP110	O43303	1012 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	MFAP3L	O75121	409 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	ENDOD1	O94919	500 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	FAM228B	P0C875	321 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	HNRNPH3	P31942	346 aa	Known RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	PTPN9	P43378	593 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	KIR2DL1	P43626	348 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	TBX2	Q13207	712 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	AUH	Q13825	339 aa	Known RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	DMC1	Q14565	340 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	MPP7	Q5T2T1	576 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	EGFLAM	Q63HQ2	1017 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	HEATR6	Q6AI08	1181 aa	Known RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	PLEKHA7	Q6IQ23	1121 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	FBXL22	Q6P050	247 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	SCYL2	Q6P3W7	929 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	ALKBH5	Q6P6C2	394 aa	Known RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	MAMSTR	Q6ZN01	415 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	CHST9	Q7L1S5	443 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	BNIPL	Q7Z465	357 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	ANKS1B	Q7Z6G8	1248 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	C14orf80	Q86SX3	495 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	CIR1	Q86X95	450 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	DRC7	Q8IY82	874 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	IL17RC	Q8NAC3	791 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	TXNDC5	Q8NBS9	432 aa	Known RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	WFDC5	Q8TCV5	224 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	FAM172A	Q8WUF8	416 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	UCMA	Q8WVF2	138 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	IGSF8	Q969P0	613 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	ACD	Q96AP0	544 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	RPRD1A	Q96P16	312 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	DNAJC7	Q99615	494 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	CHP1	Q99653	195 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	PRMT1	Q99873	361 aa	Known RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	IRX2	Q9BZI1	471 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	CIPC	Q9C0C6	399 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	ISCU	Q9H1K1	167 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	DEF6	Q9H4E7	631 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	PRMT8	Q9NR22	394 aa	Predicted RBP	10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	ABCB8	Q9NUT2	735 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	PARVA	Q9NVD7	372 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	VANGL2	Q9ULK5	521 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	SLC27A6	Q9Y2P4	619 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373	CUL9	Q8IWT3	2517 aa		10.42	□□□□□ -0.74
RFX3-210	ENST00000457373		I6L893	689 aa	Predicted RBP	10.41	□□□□□ -0.74
RFX3-210	ENST00000457373		K7ESF4	209 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	SGK1	O00141	431 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	LUC7L3	O95232	432 aa	Known RBP	10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	PABPC1	P11940	636 aa	Known RBP	10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	HLA-F	P30511	346 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	CD70	P32970	193 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	PXN	P49023	591 aa	Predicted RBP	10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	FNTB	P49356	437 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	ZNF143	P52747	638 aa	Predicted RBP	10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	OGDH	Q02218	1023 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	GFPT1	Q06210	699 aa	Predicted RBP	10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	DMWD	Q09019	674 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	LMAN2	Q12907	356 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	MTA1	Q13330	715 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	MAMLD1	Q13495	774 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	CDH18	Q13634	790 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	ARID5B	Q14865	1188 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	ARL13B	Q3SXY8	428 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	FSCB	Q5H9T9	825 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	EOGT	Q5NDL2	527 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	RABGAP1L	Q5R372	815 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	SDE2	Q6IQ49	451 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	SYT13	Q7L8C5	426 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	STRADA	Q7RTN6	431 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	CNGA4	Q8IV77	575 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	CHPF	Q8IZ52	775 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	FIBIN	Q8TAL6	211 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	CENPI	Q92674	756 aa	Predicted RBP	10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	ERLEC1	Q96DZ1	483 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	TRIM11	Q96F44	468 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	MRFAP1L1	Q96HT8	127 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	HHIP	Q96QV1	700 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	ACOX2	Q99424	681 aa		10.41	□□□□□ -0.74
RFX3-210	ENST00000457373	MAGEB5	Q9BZ81	275 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms